Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 MIR8080-201ENST00000622224 89 ntBASIC5.54□□□□□ -1.52
HOXC4P09017 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC4P09017 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC4P09017 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC4P09017 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXC4P09017 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.54□□□□□ -1.52
HOXC4P09017 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXC4P09017 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC4P09017 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC4P09017 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
HOXC4P09017 AL049634.1-201ENST00000453770 1720 ntBASIC5.54□□□□□ -1.52
HOXC4P09017 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
HOXC4P09017 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC4P09017 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC4P09017 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXC4P09017 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC4P09017 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC4P09017 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
HOXC4P09017 GAPDHP24-201ENST00000328713 983 ntBASIC5.53□□□□□ -1.52
HOXC4P09017 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXC4P09017 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HOXC4P09017 PEX12P1-201ENST00000400284 1048 ntBASIC5.53□□□□□ -1.52
HOXC4P09017 AL009179.1-201ENST00000406085 265 ntBASIC5.53□□□□□ -1.52
HOXC4P09017 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC4P09017 Z68694.1-201ENST00000413929 841 ntBASIC5.53□□□□□ -1.52
HOXC4P09017 NPM1P4-201ENST00000414095 812 ntBASIC5.53□□□□□ -1.52
HOXC4P09017 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXC4P09017 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXC4P09017 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXC4P09017 AL133445.1-201ENST00000467051 452 ntBASIC5.53□□□□□ -1.52
HOXC4P09017 RPS26P39-201ENST00000469206 341 ntBASIC5.53□□□□□ -1.52
HOXC4P09017 RPL35AP19-201ENST00000469425 329 ntBASIC5.53□□□□□ -1.52
HOXC4P09017 RN7SL177P-201ENST00000476596 299 ntBASIC5.53□□□□□ -1.52
HOXC4P09017 ATP5LP5-201ENST00000483050 299 ntBASIC5.53□□□□□ -1.52
HOXC4P09017 RN7SL214P-201ENST00000487317 265 ntBASIC5.53□□□□□ -1.52
HOXC4P09017 AC090638.1-201ENST00000498296 909 ntBASIC5.53□□□□□ -1.52
HOXC4P09017 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.53□□□□□ -1.52
HOXC4P09017 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
HOXC4P09017 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HOXC4P09017 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXC4P09017 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXC4P09017 NPM1P42-201ENST00000560329 862 ntBASIC5.53□□□□□ -1.52
HOXC4P09017 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXC4P09017 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXC4P09017 AL034374.2-201ENST00000605281 548 ntBASIC5.53□□□□□ -1.52
HOXC4P09017 AL512624.1-201ENST00000613638 469 ntBASIC5.53□□□□□ -1.52
HOXC4P09017 WBP1LP8-201ENST00000617401 327 ntBASIC5.53□□□□□ -1.52
HOXC4P09017 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXC4P09017 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HOXC4P09017 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HOXC4P09017 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HOXC4P09017 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC4P09017 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC4P09017 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC4P09017 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HOXC4P09017 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXC4P09017 NR1H5P-201ENST00000452683 1377 ntBASIC5.53□□□□□ -1.52
HOXC4P09017 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC4P09017 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
HOXC4P09017 PWAR1-201ENST00000624188 2414 ntBASIC5.53□□□□□ -1.52
HOXC4P09017 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC4P09017 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.52□□□□□ -1.53
HOXC4P09017 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC4P09017 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC4P09017 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
HOXC4P09017 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HOXC4P09017 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
HOXC4P09017 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC4P09017 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC4P09017 RARSP1-201ENST00000542842 1418 ntBASIC5.52□□□□□ -1.53
HOXC4P09017 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXC4P09017 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC4P09017 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.52□□□□□ -1.53
HOXC4P09017 AC005522.1-201ENST00000395416 346 ntBASIC5.52□□□□□ -1.53
HOXC4P09017 Z93019.1-201ENST00000416450 973 ntBASIC5.52□□□□□ -1.53
HOXC4P09017 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXC4P09017 OR6D1P-201ENST00000436165 939 ntBASIC5.52□□□□□ -1.53
HOXC4P09017 NANOGP9-201ENST00000439890 892 ntBASIC5.52□□□□□ -1.53
HOXC4P09017 CYCSP51-201ENST00000443545 318 ntBASIC5.52□□□□□ -1.53
HOXC4P09017 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.52□□□□□ -1.53
HOXC4P09017 AC007386.1-201ENST00000455212 582 ntBASIC5.52□□□□□ -1.53
HOXC4P09017 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXC4P09017 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.52□□□□□ -1.53
HOXC4P09017 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.52□□□□□ -1.53
HOXC4P09017 PMS2P3-207ENST00000529061 717 ntBASIC5.52□□□□□ -1.53
HOXC4P09017 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXC4P09017 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HOXC4P09017 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HOXC4P09017 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.52□□□□□ -1.53
HOXC4P09017 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC4P09017 MIR4489-201ENST00000578869 62 ntBASIC5.52□□□□□ -1.53
HOXC4P09017 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXC4P09017 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXC4P09017 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.52□□□□□ -1.53
HOXC4P09017 SUMO2P15-201ENST00000604285 278 ntBASIC5.52□□□□□ -1.53
HOXC4P09017 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXC4P09017 AL359513.1-201ENST00000614364 557 ntBASIC5.52□□□□□ -1.53
HOXC4P09017 AC244517.3-201ENST00000616254 1235 ntBASIC5.52□□□□□ -1.53
HOXC4P09017 MIR6837-201ENST00000620884 64 ntBASIC5.52□□□□□ -1.53
HOXC4P09017 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms