Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AL118522.2-201ENST00000616045 615 ntBASIC6.31□□□□□ -1.4
MMP3P08254 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.31□□□□□ -1.4
MMP3P08254 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
MMP3P08254 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.31□□□□□ -1.4
MMP3P08254 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
MMP3P08254 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
MMP3P08254 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
MMP3P08254 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
MMP3P08254 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
MMP3P08254 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.31□□□□□ -1.4
MMP3P08254 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.31□□□□□ -1.4
MMP3P08254 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
MMP3P08254 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.31□□□□□ -1.4
MMP3P08254 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MMP3P08254 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MMP3P08254 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
MMP3P08254 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MMP3P08254 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.3□□□□□ -1.4
MMP3P08254 AC022417.1-201ENST00000624768 1303 ntBASIC6.3□□□□□ -1.4
MMP3P08254 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MMP3P08254 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
MMP3P08254 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
MMP3P08254 SNORA70H-201ENST00000383910 135 ntBASIC6.3□□□□□ -1.4
MMP3P08254 SNORA70J-201ENST00000384182 135 ntBASIC6.3□□□□□ -1.4
MMP3P08254 SNORA70-201ENST00000384436 135 ntBASIC6.3□□□□□ -1.4
MMP3P08254 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.3□□□□□ -1.4
MMP3P08254 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC6.3□□□□□ -1.4
MMP3P08254 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
MMP3P08254 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
MMP3P08254 NPM1P22-201ENST00000427761 952 ntBASIC6.3□□□□□ -1.4
MMP3P08254 RPL7L1P9-201ENST00000431298 745 ntBASIC6.3□□□□□ -1.4
MMP3P08254 KATNBL1P2-201ENST00000433311 835 ntBASIC6.3□□□□□ -1.4
MMP3P08254 OR6D1P-201ENST00000436165 939 ntBASIC6.3□□□□□ -1.4
MMP3P08254 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.3□□□□□ -1.4
MMP3P08254 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.3□□□□□ -1.4
MMP3P08254 RPL7P45-201ENST00000455851 743 ntBASIC6.3□□□□□ -1.4
MMP3P08254 AC005532.2-201ENST00000467154 373 ntBASIC6.3□□□□□ -1.4
MMP3P08254 AC004815.1-201ENST00000484185 331 ntBASIC6.3□□□□□ -1.4
MMP3P08254 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC6.3□□□□□ -1.4
MMP3P08254 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.3□□□□□ -1.4
MMP3P08254 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
MMP3P08254 TOMM22P4-201ENST00000511318 336 ntBASIC6.3□□□□□ -1.4
MMP3P08254 CDC42P3-201ENST00000518493 633 ntBASIC6.3□□□□□ -1.4
MMP3P08254 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.3□□□□□ -1.4
MMP3P08254 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.3□□□□□ -1.4
MMP3P08254 AC004825.1-201ENST00000555068 586 ntBASIC6.3□□□□□ -1.4
MMP3P08254 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.3□□□□□ -1.4
MMP3P08254 AC016590.3-201ENST00000611171 753 ntBASIC6.3□□□□□ -1.4
MMP3P08254 AC104820.1-201ENST00000624183 307 ntBASIC6.3□□□□□ -1.4
MMP3P08254 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.3□□□□□ -1.4
MMP3P08254 AC063952.1-203ENST00000634410 658 ntBASIC6.3□□□□□ -1.4
MMP3P08254 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
MMP3P08254 AL163152.1-201ENST00000642001 374 ntBASIC6.3□□□□□ -1.4
MMP3P08254 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.3□□□□□ -1.4
MMP3P08254 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
MMP3P08254 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
MMP3P08254 AC011504.1-201ENST00000623331 4103 ntBASIC6.3□□□□□ -1.4
MMP3P08254 AC073429.2-201ENST00000569694 1444 ntBASIC6.3□□□□□ -1.4
MMP3P08254 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
MMP3P08254 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MMP3P08254 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
MMP3P08254 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
MMP3P08254 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
MMP3P08254 AP001157.1-201ENST00000550837 2339 ntBASIC6.3□□□□□ -1.4
MMP3P08254 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
MMP3P08254 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MMP3P08254 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.29□□□□□ -1.4
MMP3P08254 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
MMP3P08254 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
MMP3P08254 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MMP3P08254 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.29□□□□□ -1.4
MMP3P08254 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
MMP3P08254 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MMP3P08254 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
MMP3P08254 RNU1-77P-201ENST00000390868 162 ntBASIC6.29□□□□□ -1.4
MMP3P08254 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
MMP3P08254 AL121835.1-201ENST00000404250 354 ntBASIC6.29□□□□□ -1.4
MMP3P08254 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.29□□□□□ -1.4
MMP3P08254 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC6.29□□□□□ -1.4
MMP3P08254 AL139148.1-201ENST00000427122 680 ntBASIC6.29□□□□□ -1.4
MMP3P08254 NANOGP4-201ENST00000427230 913 ntBASIC6.29□□□□□ -1.4
MMP3P08254 CYCSP6-201ENST00000434498 302 ntBASIC6.29□□□□□ -1.4
MMP3P08254 LDHAP2-201ENST00000437325 985 ntBASIC6.29□□□□□ -1.4
MMP3P08254 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.29□□□□□ -1.4
MMP3P08254 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.29□□□□□ -1.4
MMP3P08254 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC6.29□□□□□ -1.4
MMP3P08254 RPS26P41-201ENST00000450370 284 ntBASIC6.29□□□□□ -1.4
MMP3P08254 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC6.29□□□□□ -1.4
MMP3P08254 RN7SL172P-201ENST00000460535 303 ntBASIC6.29□□□□□ -1.4
MMP3P08254 AC079080.1-201ENST00000479841 822 ntBASIC6.29□□□□□ -1.4
MMP3P08254 RPL7P39-201ENST00000481157 744 ntBASIC6.29□□□□□ -1.4
MMP3P08254 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.29□□□□□ -1.4
MMP3P08254 TRBV5-2-201ENST00000489095 273 ntBASIC6.29□□□□□ -1.4
MMP3P08254 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.29□□□□□ -1.4
MMP3P08254 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.29□□□□□ -1.4
MMP3P08254 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
MMP3P08254 IGLV3-24-201ENST00000517477 197 ntBASIC6.29□□□□□ -1.4
MMP3P08254 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.29□□□□□ -1.4
MMP3P08254 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.29□□□□□ -1.4
MMP3P08254 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms