Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RNU6-362P-201ENST00000516736 90 ntBASIC6.22□□□□□ -1.41
RB1P06400 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.22□□□□□ -1.41
RB1P06400 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.22□□□□□ -1.41
RB1P06400 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.22□□□□□ -1.41
RB1P06400 TXNP4-201ENST00000575018 310 ntBASIC6.22□□□□□ -1.41
RB1P06400 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.22□□□□□ -1.41
RB1P06400 SUGT1P3-202ENST00000604259 383 ntBASIC6.22□□□□□ -1.41
RB1P06400 AC024589.2-201ENST00000605642 1294 ntBASIC6.22□□□□□ -1.41
RB1P06400 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC6.22□□□□□ -1.41
RB1P06400 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.22□□□□□ -1.41
RB1P06400 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RB1P06400 LINC01963-201ENST00000562038 3148 ntBASIC6.22□□□□□ -1.41
RB1P06400 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
RB1P06400 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.22□□□□□ -1.41
RB1P06400 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.22□□□□□ -1.41
RB1P06400 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.22□□□□□ -1.41
RB1P06400 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RB1P06400 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.21□□□□□ -1.41
RB1P06400 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
RB1P06400 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
RB1P06400 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
RB1P06400 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.21□□□□□ -1.41
RB1P06400 AC009779.8-201ENST00000641684 4384 ntBASIC6.21□□□□□ -1.41
RB1P06400 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
RB1P06400 AC007938.2-201ENST00000604666 2634 ntBASIC6.21□□□□□ -1.41
RB1P06400 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.21□□□□□ -1.42
RB1P06400 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RB1P06400 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
RB1P06400 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RB1P06400 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
RB1P06400 AP003170.5-201ENST00000397185 335 ntBASIC6.21□□□□□ -1.42
RB1P06400 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RB1P06400 RPL23AP27-201ENST00000415161 451 ntBASIC6.21□□□□□ -1.42
RB1P06400 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.21□□□□□ -1.42
RB1P06400 AC023141.8-201ENST00000442554 208 ntBASIC6.21□□□□□ -1.42
RB1P06400 AL645937.3-201ENST00000453647 936 ntBASIC6.21□□□□□ -1.42
RB1P06400 AC005532.2-201ENST00000467154 373 ntBASIC6.21□□□□□ -1.42
RB1P06400 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
RB1P06400 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RB1P06400 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.21□□□□□ -1.42
RB1P06400 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.21□□□□□ -1.42
RB1P06400 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.21□□□□□ -1.42
RB1P06400 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.21□□□□□ -1.42
RB1P06400 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.21□□□□□ -1.42
RB1P06400 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
RB1P06400 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC6.21□□□□□ -1.42
RB1P06400 OR4A46P-201ENST00000527255 933 ntBASIC6.21□□□□□ -1.42
RB1P06400 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.21□□□□□ -1.42
RB1P06400 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.21□□□□□ -1.42
RB1P06400 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.21□□□□□ -1.42
RB1P06400 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.21□□□□□ -1.42
RB1P06400 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.21□□□□□ -1.42
RB1P06400 GARSP1-201ENST00000570895 719 ntBASIC6.21□□□□□ -1.42
RB1P06400 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RB1P06400 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.21□□□□□ -1.42
RB1P06400 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.21□□□□□ -1.42
RB1P06400 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.21□□□□□ -1.42
RB1P06400 AC063977.5-201ENST00000601044 974 ntBASIC6.21□□□□□ -1.42
RB1P06400 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.21□□□□□ -1.42
RB1P06400 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.21□□□□□ -1.42
RB1P06400 SAMMSON-209ENST00000641222 1100 ntBASIC6.21□□□□□ -1.42
RB1P06400 OR11H2-202ENST00000641517 1085 ntBASIC6.21□□□□□ -1.42
RB1P06400 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
RB1P06400 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.21□□□□□ -1.42
RB1P06400 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RB1P06400 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RB1P06400 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RB1P06400 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RB1P06400 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.21□□□□□ -1.42
RB1P06400 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
RB1P06400 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.21□□□□□ -1.42
RB1P06400 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
RB1P06400 AL161756.3-201ENST00000641216 2071 ntBASIC6.21□□□□□ -1.42
RB1P06400 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.21□□□□□ -1.42
RB1P06400 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RB1P06400 AL355377.1-201ENST00000621125 1653 ntBASIC6.2□□□□□ -1.42
RB1P06400 AC119674.1-213ENST00000641177 1386 ntBASIC6.2□□□□□ -1.42
RB1P06400 AC018628.1-201ENST00000624147 3819 ntBASIC6.2□□□□□ -1.42
RB1P06400 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
RB1P06400 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RB1P06400 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RB1P06400 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.2□□□□□ -1.42
RB1P06400 ZNF101P1-201ENST00000435701 1720 ntBASIC6.2□□□□□ -1.42
RB1P06400 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.2□□□□□ -1.42
RB1P06400 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RB1P06400 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RB1P06400 THAP12P9-201ENST00000503971 2360 ntBASIC6.2□□□□□ -1.42
RB1P06400 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
RB1P06400 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
RB1P06400 RNA5SP507-201ENST00000363603 121 ntBASIC6.2□□□□□ -1.42
RB1P06400 SNORD8-201ENST00000363915 110 ntBASIC6.2□□□□□ -1.42
RB1P06400 ZNF92P1Y-201ENST00000415010 1191 ntBASIC6.2□□□□□ -1.42
RB1P06400 AC096644.3-201ENST00000416788 338 ntBASIC6.2□□□□□ -1.42
RB1P06400 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.2□□□□□ -1.42
RB1P06400 AC019205.1-201ENST00000421830 730 ntBASIC6.2□□□□□ -1.42
RB1P06400 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.2□□□□□ -1.42
RB1P06400 OTX2P1-201ENST00000450956 354 ntBASIC6.2□□□□□ -1.42
RB1P06400 AL356390.1-201ENST00000455684 397 ntBASIC6.2□□□□□ -1.42
RB1P06400 AC112187.1-201ENST00000455837 479 ntBASIC6.2□□□□□ -1.42
RB1P06400 AC004453.1-201ENST00000487895 408 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms