Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.85□□□□□ -1.47
PDGFBP01127 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDGFBP01127 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDGFBP01127 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PDGFBP01127 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
PDGFBP01127 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
PDGFBP01127 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
PDGFBP01127 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PDGFBP01127 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.85□□□□□ -1.47
PDGFBP01127 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PDGFBP01127 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.85□□□□□ -1.47
PDGFBP01127 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDGFBP01127 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDGFBP01127 RNA5SP305-201ENST00000362665 119 ntBASIC5.85□□□□□ -1.47
PDGFBP01127 RNA5SP350-201ENST00000363298 111 ntBASIC5.85□□□□□ -1.47
PDGFBP01127 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.85□□□□□ -1.47
PDGFBP01127 AL360271.1-201ENST00000395679 510 ntBASIC5.85□□□□□ -1.47
PDGFBP01127 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDGFBP01127 TRGV7-201ENST00000427089 353 ntBASIC5.85□□□□□ -1.47
PDGFBP01127 AC091390.2-201ENST00000432573 374 ntBASIC5.85□□□□□ -1.47
PDGFBP01127 BTG3P1-201ENST00000435859 716 ntBASIC5.85□□□□□ -1.47
PDGFBP01127 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PDGFBP01127 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.85□□□□□ -1.47
PDGFBP01127 TRBV8-1-201ENST00000481590 279 ntBASIC5.85□□□□□ -1.47
PDGFBP01127 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.85□□□□□ -1.47
PDGFBP01127 RN7SL346P-201ENST00000491561 294 ntBASIC5.85□□□□□ -1.47
PDGFBP01127 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.85□□□□□ -1.47
PDGFBP01127 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.85□□□□□ -1.47
PDGFBP01127 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.85□□□□□ -1.47
PDGFBP01127 AC025423.2-201ENST00000537570 439 ntBASIC5.85□□□□□ -1.47
PDGFBP01127 AC137768.1-201ENST00000549998 553 ntBASIC5.85□□□□□ -1.47
PDGFBP01127 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.85□□□□□ -1.47
PDGFBP01127 AL512310.9-201ENST00000553311 948 ntBASIC5.85□□□□□ -1.47
PDGFBP01127 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.85□□□□□ -1.47
PDGFBP01127 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.85□□□□□ -1.47
PDGFBP01127 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.85□□□□□ -1.47
PDGFBP01127 AC006116.3-201ENST00000592968 361 ntBASIC5.85□□□□□ -1.47
PDGFBP01127 U1.34-201ENST00000618578 162 ntBASIC5.85□□□□□ -1.47
PDGFBP01127 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.85□□□□□ -1.47
PDGFBP01127 AP000346.3-201ENST00000622821 210 ntBASIC5.85□□□□□ -1.47
PDGFBP01127 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.85□□□□□ -1.47
PDGFBP01127 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.85□□□□□ -1.47
PDGFBP01127 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDGFBP01127 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
PDGFBP01127 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.85□□□□□ -1.47
PDGFBP01127 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
PDGFBP01127 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.85□□□□□ -1.47
PDGFBP01127 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PDGFBP01127 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PDGFBP01127 AL442128.2-201ENST00000620246 1824 ntBASIC5.85□□□□□ -1.47
PDGFBP01127 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.85□□□□□ -1.47
PDGFBP01127 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
PDGFBP01127 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.85□□□□□ -1.47
PDGFBP01127 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC5.85□□□□□ -1.47
PDGFBP01127 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDGFBP01127 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDGFBP01127 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.84□□□□□ -1.47
PDGFBP01127 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.84□□□□□ -1.47
PDGFBP01127 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
PDGFBP01127 AC018628.1-201ENST00000624147 3819 ntBASIC5.84□□□□□ -1.47
PDGFBP01127 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDGFBP01127 AC034229.2-201ENST00000566945 2508 ntBASIC5.84□□□□□ -1.47
PDGFBP01127 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.84□□□□□ -1.47
PDGFBP01127 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDGFBP01127 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC5.84□□□□□ -1.47
PDGFBP01127 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.84□□□□□ -1.47
PDGFBP01127 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDGFBP01127 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.84□□□□□ -1.47
PDGFBP01127 AC233968.1-201ENST00000611212 1300 ntBASIC5.84□□□□□ -1.47
PDGFBP01127 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PDGFBP01127 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDGFBP01127 AL035419.1-201ENST00000397037 564 ntBASIC5.84□□□□□ -1.47
PDGFBP01127 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.84□□□□□ -1.47
PDGFBP01127 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.84□□□□□ -1.47
PDGFBP01127 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.84□□□□□ -1.47
PDGFBP01127 AL133325.1-201ENST00000421090 382 ntBASIC5.84□□□□□ -1.47
PDGFBP01127 PRUNEP1-201ENST00000425846 705 ntBASIC5.84□□□□□ -1.47
PDGFBP01127 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.84□□□□□ -1.47
PDGFBP01127 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.84□□□□□ -1.47
PDGFBP01127 AC023141.8-201ENST00000442554 208 ntBASIC5.84□□□□□ -1.47
PDGFBP01127 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.84□□□□□ -1.47
PDGFBP01127 MTND6P5-201ENST00000448266 512 ntBASIC5.84□□□□□ -1.47
PDGFBP01127 AC009963.2-201ENST00000453431 138 ntBASIC5.84□□□□□ -1.47
PDGFBP01127 RPS27AP3-201ENST00000453803 454 ntBASIC5.84□□□□□ -1.47
PDGFBP01127 AC105233.1-201ENST00000498840 781 ntBASIC5.84□□□□□ -1.47
PDGFBP01127 RPEP1-201ENST00000504507 658 ntBASIC5.84□□□□□ -1.47
PDGFBP01127 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.84□□□□□ -1.47
PDGFBP01127 AC008126.1-201ENST00000549019 480 ntBASIC5.84□□□□□ -1.47
PDGFBP01127 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.84□□□□□ -1.47
PDGFBP01127 AC015818.6-201ENST00000584274 634 ntBASIC5.84□□□□□ -1.47
PDGFBP01127 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.84□□□□□ -1.47
PDGFBP01127 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.84□□□□□ -1.47
PDGFBP01127 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.84□□□□□ -1.47
PDGFBP01127 AP002799.1-201ENST00000623552 423 ntBASIC5.84□□□□□ -1.47
PDGFBP01127 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC5.84□□□□□ -1.47
PDGFBP01127 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDGFBP01127 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDGFBP01127 AC007938.2-201ENST00000604666 2634 ntBASIC5.84□□□□□ -1.47
PDGFBP01127 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.84□□□□□ -1.47
PDGFBP01127 AL591848.4-201ENST00000567832 3472 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms