Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CNOT4O95628 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.13□□□□□ -1.43
CNOT4O95628 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.13□□□□□ -1.43
CNOT4O95628 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CNOT4O95628 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CNOT4O95628 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.13□□□□□ -1.43
CNOT4O95628 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CNOT4O95628 AL136131.1-201ENST00000406079 803 ntBASIC6.13□□□□□ -1.43
CNOT4O95628 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.13□□□□□ -1.43
CNOT4O95628 SETP15-201ENST00000412724 337 ntBASIC6.13□□□□□ -1.43
CNOT4O95628 TEX41-202ENST00000414256 604 ntTSL 5 BASIC6.13□□□□□ -1.43
CNOT4O95628 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.13□□□□□ -1.43
CNOT4O95628 RPF2P1-201ENST00000424137 906 ntBASIC6.13□□□□□ -1.43
CNOT4O95628 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.13□□□□□ -1.43
CNOT4O95628 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.13□□□□□ -1.43
CNOT4O95628 AL160175.1-201ENST00000428124 247 ntBASIC6.13□□□□□ -1.43
CNOT4O95628 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.13□□□□□ -1.43
CNOT4O95628 AC018804.1-201ENST00000430381 618 ntBASIC6.13□□□□□ -1.43
CNOT4O95628 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.13□□□□□ -1.43
CNOT4O95628 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC6.13□□□□□ -1.43
CNOT4O95628 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.13□□□□□ -1.43
CNOT4O95628 AL138899.2-201ENST00000439139 499 ntBASIC6.13□□□□□ -1.43
CNOT4O95628 AC000041.1-201ENST00000439655 175 ntBASIC6.13□□□□□ -1.43
CNOT4O95628 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CNOT4O95628 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC6.13□□□□□ -1.43
CNOT4O95628 AL390728.3-201ENST00000452704 270 ntBASIC6.13□□□□□ -1.43
CNOT4O95628 Z95152.1-201ENST00000453556 656 ntBASIC6.13□□□□□ -1.43
CNOT4O95628 AC108734.3-201ENST00000481241 1165 ntBASIC6.13□□□□□ -1.43
CNOT4O95628 RPS4XP23-201ENST00000487801 237 ntBASIC6.13□□□□□ -1.43
CNOT4O95628 MTND6P8-201ENST00000503471 522 ntBASIC6.13□□□□□ -1.43
CNOT4O95628 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.13□□□□□ -1.43
CNOT4O95628 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC6.13□□□□□ -1.43
CNOT4O95628 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.13□□□□□ -1.43
CNOT4O95628 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.13□□□□□ -1.43
CNOT4O95628 EEF1B2P2-201ENST00000519625 676 ntBASIC6.13□□□□□ -1.43
CNOT4O95628 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.13□□□□□ -1.43
CNOT4O95628 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC6.13□□□□□ -1.43
CNOT4O95628 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC6.13□□□□□ -1.43
CNOT4O95628 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.13□□□□□ -1.43
CNOT4O95628 OR4A6P-201ENST00000534364 970 ntBASIC6.13□□□□□ -1.43
CNOT4O95628 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.13□□□□□ -1.43
CNOT4O95628 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CNOT4O95628 AC106734.1-201ENST00000568646 663 ntBASIC6.13□□□□□ -1.43
CNOT4O95628 AC135628.1-201ENST00000568867 534 ntBASIC6.13□□□□□ -1.43
CNOT4O95628 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.13□□□□□ -1.43
CNOT4O95628 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.13□□□□□ -1.43
CNOT4O95628 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.13□□□□□ -1.43
CNOT4O95628 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.13□□□□□ -1.43
CNOT4O95628 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.13□□□□□ -1.43
CNOT4O95628 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.13□□□□□ -1.43
CNOT4O95628 AC103591.3-201ENST00000608684 209 ntBASIC6.13□□□□□ -1.43
CNOT4O95628 AC009163.6-201ENST00000612367 342 ntBASIC6.13□□□□□ -1.43
CNOT4O95628 AP005212.3-201ENST00000619964 528 ntBASIC6.13□□□□□ -1.43
CNOT4O95628 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CNOT4O95628 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CNOT4O95628 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.13□□□□□ -1.43
CNOT4O95628 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
CNOT4O95628 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CNOT4O95628 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.13□□□□□ -1.43
CNOT4O95628 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CNOT4O95628 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.13□□□□□ -1.43
CNOT4O95628 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
CNOT4O95628 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CNOT4O95628 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CNOT4O95628 ATP5BP1-201ENST00000411980 1574 ntBASIC6.13□□□□□ -1.43
CNOT4O95628 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CNOT4O95628 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.13□□□□□ -1.43
CNOT4O95628 UGT2B26P-201ENST00000508672 1613 ntBASIC6.13□□□□□ -1.43
CNOT4O95628 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CNOT4O95628 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CNOT4O95628 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.13□□□□□ -1.43
CNOT4O95628 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CNOT4O95628 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.13□□□□□ -1.43
CNOT4O95628 AC132825.1-201ENST00000463573 2247 ntBASIC6.13□□□□□ -1.43
CNOT4O95628 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.13□□□□□ -1.43
CNOT4O95628 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CNOT4O95628 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
CNOT4O95628 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.12□□□□□ -1.43
CNOT4O95628 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CNOT4O95628 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CNOT4O95628 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CNOT4O95628 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CNOT4O95628 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.12□□□□□ -1.43
CNOT4O95628 RNFT1P3-201ENST00000340898 1052 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 RN7SKP189-201ENST00000365042 330 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 RN7SKP186-201ENST00000365371 303 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 AC092634.1-201ENST00000366505 199 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CNOT4O95628 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
CNOT4O95628 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
CNOT4O95628 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.12□□□□□ -1.43
CNOT4O95628 AC245036.1-201ENST00000391727 309 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CNOT4O95628 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CNOT4O95628 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.12□□□□□ -1.43
CNOT4O95628 AL132875.1-201ENST00000403623 949 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 RPL7P27-201ENST00000403775 720 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.12□□□□□ -1.43
CNOT4O95628 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CNOT4O95628 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms