Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NKX2-2O95096 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NKX2-2O95096 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.45□□□□□ -1.54
NKX2-2O95096 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NKX2-2O95096 AC026523.2-201ENST00000625039 7739 ntBASIC5.45□□□□□ -1.54
NKX2-2O95096 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NKX2-2O95096 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NKX2-2O95096 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NKX2-2O95096 LYARP1-201ENST00000436977 1501 ntBASIC5.45□□□□□ -1.54
NKX2-2O95096 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
NKX2-2O95096 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
NKX2-2O95096 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NKX2-2O95096 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
NKX2-2O95096 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
NKX2-2O95096 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NKX2-2O95096 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.45□□□□□ -1.54
NKX2-2O95096 NENFP1-201ENST00000419476 466 ntBASIC5.45□□□□□ -1.54
NKX2-2O95096 MTCYBP7-201ENST00000419540 1134 ntBASIC5.45□□□□□ -1.54
NKX2-2O95096 SETP9-201ENST00000423837 832 ntBASIC5.45□□□□□ -1.54
NKX2-2O95096 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.45□□□□□ -1.54
NKX2-2O95096 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.45□□□□□ -1.54
NKX2-2O95096 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.45□□□□□ -1.54
NKX2-2O95096 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.45□□□□□ -1.54
NKX2-2O95096 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NKX2-2O95096 Z83838.1-202ENST00000456225 839 ntBASIC5.45□□□□□ -1.54
NKX2-2O95096 CST12P-201ENST00000457644 362 ntBASIC5.45□□□□□ -1.54
NKX2-2O95096 AC108729.2-201ENST00000476543 840 ntBASIC5.45□□□□□ -1.54
NKX2-2O95096 RPL23AP73-201ENST00000492507 471 ntBASIC5.45□□□□□ -1.54
NKX2-2O95096 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.45□□□□□ -1.54
NKX2-2O95096 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.45□□□□□ -1.54
NKX2-2O95096 AC010468.3-201ENST00000508225 458 ntBASIC5.45□□□□□ -1.54
NKX2-2O95096 AC021146.7-201ENST00000509604 775 ntBASIC5.45□□□□□ -1.54
NKX2-2O95096 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.45□□□□□ -1.54
NKX2-2O95096 RNA5SP473-201ENST00000516402 125 ntBASIC5.45□□□□□ -1.54
NKX2-2O95096 AC011853.1-201ENST00000518911 454 ntBASIC5.45□□□□□ -1.54
NKX2-2O95096 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.45□□□□□ -1.54
NKX2-2O95096 OR4A46P-201ENST00000527255 933 ntBASIC5.45□□□□□ -1.54
NKX2-2O95096 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.45□□□□□ -1.54
NKX2-2O95096 AC092451.2-201ENST00000538746 658 ntBASIC5.45□□□□□ -1.54
NKX2-2O95096 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.45□□□□□ -1.54
NKX2-2O95096 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.45□□□□□ -1.54
NKX2-2O95096 AC091078.2-201ENST00000557145 559 ntBASIC5.45□□□□□ -1.54
NKX2-2O95096 AC233266.2-201ENST00000567067 528 ntBASIC5.45□□□□□ -1.54
NKX2-2O95096 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.45□□□□□ -1.54
NKX2-2O95096 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.45□□□□□ -1.54
NKX2-2O95096 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.45□□□□□ -1.54
NKX2-2O95096 AC005242.1-201ENST00000585658 438 ntBASIC5.45□□□□□ -1.54
NKX2-2O95096 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.45□□□□□ -1.54
NKX2-2O95096 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.45□□□□□ -1.54
NKX2-2O95096 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.45□□□□□ -1.54
NKX2-2O95096 MIR6793-201ENST00000612376 63 ntBASIC5.45□□□□□ -1.54
NKX2-2O95096 AL645927.2-201ENST00000618350 349 ntBASIC5.45□□□□□ -1.54
NKX2-2O95096 AC105105.5-201ENST00000622635 1294 ntBASIC5.45□□□□□ -1.54
NKX2-2O95096 AC092159.4-201ENST00000624944 550 ntBASIC5.45□□□□□ -1.54
NKX2-2O95096 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.45□□□□□ -1.54
NKX2-2O95096 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.45□□□□□ -1.54
NKX2-2O95096 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.45□□□□□ -1.54
NKX2-2O95096 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.45□□□□□ -1.54
NKX2-2O95096 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.45□□□□□ -1.54
NKX2-2O95096 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
NKX2-2O95096 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
NKX2-2O95096 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.45□□□□□ -1.54
NKX2-2O95096 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NKX2-2O95096 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
NKX2-2O95096 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NKX2-2O95096 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NKX2-2O95096 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.45□□□□□ -1.54
NKX2-2O95096 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NKX2-2O95096 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.45□□□□□ -1.54
NKX2-2O95096 AC027088.4-201ENST00000611559 1947 ntBASIC5.44□□□□□ -1.54
NKX2-2O95096 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NKX2-2O95096 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NKX2-2O95096 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
NKX2-2O95096 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NKX2-2O95096 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.44□□□□□ -1.54
NKX2-2O95096 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NKX2-2O95096 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NKX2-2O95096 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.44□□□□□ -1.54
NKX2-2O95096 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.44□□□□□ -1.54
NKX2-2O95096 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NKX2-2O95096 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NKX2-2O95096 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
NKX2-2O95096 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NKX2-2O95096 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.44□□□□□ -1.54
NKX2-2O95096 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
NKX2-2O95096 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
NKX2-2O95096 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.44□□□□□ -1.54
NKX2-2O95096 AL353692.2-201ENST00000407054 335 ntBASIC5.44□□□□□ -1.54
NKX2-2O95096 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.44□□□□□ -1.54
NKX2-2O95096 AL354890.1-201ENST00000413730 346 ntBASIC5.44□□□□□ -1.54
NKX2-2O95096 BX284632.2-201ENST00000421091 399 ntBASIC5.44□□□□□ -1.54
NKX2-2O95096 AC093084.1-201ENST00000424233 687 ntBASIC5.44□□□□□ -1.54
NKX2-2O95096 RPS6P14-201ENST00000425165 719 ntBASIC5.44□□□□□ -1.54
NKX2-2O95096 UBE2V1P6-201ENST00000430840 422 ntBASIC5.44□□□□□ -1.54
NKX2-2O95096 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.44□□□□□ -1.54
NKX2-2O95096 AL512605.1-202ENST00000441919 381 ntBASIC5.44□□□□□ -1.54
NKX2-2O95096 AL359955.2-201ENST00000445380 353 ntBASIC5.44□□□□□ -1.54
NKX2-2O95096 AC006326.1-201ENST00000445465 787 ntBASIC5.44□□□□□ -1.54
NKX2-2O95096 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.44□□□□□ -1.54
NKX2-2O95096 FRG2FP-204ENST00000453982 852 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms