Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.33□□□□□ -1.56
ZIC3O60481 AL663074.2-201ENST00000440621 479 ntBASIC5.33□□□□□ -1.56
ZIC3O60481 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.33□□□□□ -1.56
ZIC3O60481 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.33□□□□□ -1.56
ZIC3O60481 GAPDHP71-201ENST00000511530 1003 ntBASIC5.33□□□□□ -1.56
ZIC3O60481 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.33□□□□□ -1.56
ZIC3O60481 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.33□□□□□ -1.56
ZIC3O60481 AC067904.2-201ENST00000517322 1283 ntBASIC5.33□□□□□ -1.56
ZIC3O60481 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.33□□□□□ -1.56
ZIC3O60481 IGKV2-4-201ENST00000523070 340 ntBASIC5.33□□□□□ -1.56
ZIC3O60481 GTF2IP11-201ENST00000526931 420 ntBASIC5.33□□□□□ -1.56
ZIC3O60481 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.33□□□□□ -1.56
ZIC3O60481 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ZIC3O60481 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.33□□□□□ -1.56
ZIC3O60481 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.33□□□□□ -1.56
ZIC3O60481 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.33□□□□□ -1.56
ZIC3O60481 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.33□□□□□ -1.56
ZIC3O60481 GARSP1-201ENST00000570895 719 ntBASIC5.33□□□□□ -1.56
ZIC3O60481 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.33□□□□□ -1.56
ZIC3O60481 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
ZIC3O60481 BNIP3P40-201ENST00000596017 556 ntBASIC5.33□□□□□ -1.56
ZIC3O60481 COX6CP7-201ENST00000597056 208 ntBASIC5.33□□□□□ -1.56
ZIC3O60481 AC100767.2-201ENST00000604840 693 ntBASIC5.33□□□□□ -1.56
ZIC3O60481 RPL12P48-201ENST00000605620 304 ntBASIC5.33□□□□□ -1.56
ZIC3O60481 AL139099.4-201ENST00000614802 114 ntBASIC5.33□□□□□ -1.56
ZIC3O60481 AL445670.1-201ENST00000618889 801 ntBASIC5.33□□□□□ -1.56
ZIC3O60481 AC018659.2-201ENST00000624690 715 ntBASIC5.33□□□□□ -1.56
ZIC3O60481 SNX18P12-201ENST00000624821 759 ntBASIC5.33□□□□□ -1.56
ZIC3O60481 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.33□□□□□ -1.56
ZIC3O60481 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.33□□□□□ -1.56
ZIC3O60481 OR11H2-202ENST00000641517 1085 ntBASIC5.33□□□□□ -1.56
ZIC3O60481 OR8G3P-202ENST00000641572 1255 ntBASIC5.33□□□□□ -1.56
ZIC3O60481 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
ZIC3O60481 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ZIC3O60481 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
ZIC3O60481 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ZIC3O60481 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ZIC3O60481 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
ZIC3O60481 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.33□□□□□ -1.56
ZIC3O60481 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ZIC3O60481 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ZIC3O60481 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
ZIC3O60481 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ZIC3O60481 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ZIC3O60481 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.32□□□□□ -1.56
ZIC3O60481 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ZIC3O60481 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ZIC3O60481 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ZIC3O60481 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
ZIC3O60481 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ZIC3O60481 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
ZIC3O60481 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ZIC3O60481 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
ZIC3O60481 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ZIC3O60481 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.32□□□□□ -1.56
ZIC3O60481 OR52B3P-201ENST00000314715 928 ntBASIC5.32□□□□□ -1.56
ZIC3O60481 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ZIC3O60481 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
ZIC3O60481 SNORA11.3-201ENST00000408471 128 ntBASIC5.32□□□□□ -1.56
ZIC3O60481 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.32□□□□□ -1.56
ZIC3O60481 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ZIC3O60481 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.32□□□□□ -1.56
ZIC3O60481 RPS3P2-201ENST00000421346 701 ntBASIC5.32□□□□□ -1.56
ZIC3O60481 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.32□□□□□ -1.56
ZIC3O60481 MTND2P21-201ENST00000436242 1042 ntBASIC5.32□□□□□ -1.56
ZIC3O60481 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.32□□□□□ -1.56
ZIC3O60481 AC073109.1-201ENST00000445066 978 ntBASIC5.32□□□□□ -1.56
ZIC3O60481 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ZIC3O60481 AC099521.1-201ENST00000482557 334 ntBASIC5.32□□□□□ -1.56
ZIC3O60481 RPL38P3-201ENST00000484463 213 ntBASIC5.32□□□□□ -1.56
ZIC3O60481 PSMA2P2-201ENST00000504319 686 ntBASIC5.32□□□□□ -1.56
ZIC3O60481 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
ZIC3O60481 AC112198.4-201ENST00000515450 351 ntBASIC5.32□□□□□ -1.56
ZIC3O60481 MIR2117-201ENST00000516780 80 ntBASIC5.32□□□□□ -1.56
ZIC3O60481 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.32□□□□□ -1.56
ZIC3O60481 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.32□□□□□ -1.56
ZIC3O60481 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.32□□□□□ -1.56
ZIC3O60481 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
ZIC3O60481 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.32□□□□□ -1.56
ZIC3O60481 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.32□□□□□ -1.56
ZIC3O60481 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ZIC3O60481 ZNF322P1-201ENST00000568013 1209 ntBASIC5.32□□□□□ -1.56
ZIC3O60481 OOSP1P2-201ENST00000579644 351 ntBASIC5.32□□□□□ -1.56
ZIC3O60481 AC006116.7-201ENST00000590141 756 ntBASIC5.32□□□□□ -1.56
ZIC3O60481 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.32□□□□□ -1.56
ZIC3O60481 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC5.32□□□□□ -1.56
ZIC3O60481 AC133794.1-201ENST00000602731 914 ntBASIC5.32□□□□□ -1.56
ZIC3O60481 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.32□□□□□ -1.56
ZIC3O60481 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.32□□□□□ -1.56
ZIC3O60481 AC015922.4-201ENST00000612568 690 ntBASIC5.32□□□□□ -1.56
ZIC3O60481 SNORA11.6-201ENST00000619030 128 ntBASIC5.32□□□□□ -1.56
ZIC3O60481 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ZIC3O60481 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
ZIC3O60481 WDR95P-201ENST00000425638 1542 ntBASIC5.32□□□□□ -1.56
ZIC3O60481 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ZIC3O60481 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ZIC3O60481 AL078595.2-201ENST00000605309 1780 ntBASIC5.32□□□□□ -1.56
ZIC3O60481 OFD1P17-201ENST00000437639 3018 ntBASIC5.31□□□□□ -1.56
ZIC3O60481 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
ZIC3O60481 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms