Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 NANOGP3-201ENST00000605855 286 ntBASIC6.08□□□□□ -1.44
O00370 AL035661.1-201ENST00000620459 1144 ntBASIC6.08□□□□□ -1.44
O00370 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
O00370 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
O00370 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
O00370 AL442128.2-201ENST00000620246 1824 ntBASIC6.08□□□□□ -1.44
O00370 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
O00370 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
O00370 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
O00370 AC106872.5-201ENST00000508856 1416 ntBASIC6.08□□□□□ -1.44
O00370 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.07□□□□□ -1.44
O00370 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.07□□□□□ -1.44
O00370 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
O00370 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
O00370 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
O00370 GTF2IP4-201ENST00000453092 2054 ntBASIC6.07□□□□□ -1.44
O00370 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
O00370 SNORA64.1-201ENST00000362600 132 ntBASIC6.07□□□□□ -1.44
O00370 RN7SKP15-201ENST00000364742 309 ntBASIC6.07□□□□□ -1.44
O00370 VN1R3-201ENST00000418822 919 ntBASIC6.07□□□□□ -1.44
O00370 AL022331.1-201ENST00000429025 477 ntBASIC6.07□□□□□ -1.44
O00370 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.07□□□□□ -1.44
O00370 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.07□□□□□ -1.44
O00370 HMGB3P24-201ENST00000433260 622 ntBASIC6.07□□□□□ -1.44
O00370 AC138761.5-201ENST00000433967 325 ntBASIC6.07□□□□□ -1.44
O00370 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.07□□□□□ -1.44
O00370 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.07□□□□□ -1.44
O00370 MTND2P40-201ENST00000436718 841 ntBASIC6.07□□□□□ -1.44
O00370 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.07□□□□□ -1.44
O00370 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.07□□□□□ -1.44
O00370 MED28P3-201ENST00000444288 531 ntBASIC6.07□□□□□ -1.44
O00370 AC073109.1-201ENST00000445066 978 ntBASIC6.07□□□□□ -1.44
O00370 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.07□□□□□ -1.44
O00370 AL445665.1-202ENST00000452436 324 ntBASIC6.07□□□□□ -1.44
O00370 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.07□□□□□ -1.44
O00370 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.07□□□□□ -1.44
O00370 AC105420.1-201ENST00000504389 582 ntBASIC6.07□□□□□ -1.44
O00370 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.07□□□□□ -1.44
O00370 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.07□□□□□ -1.44
O00370 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.07□□□□□ -1.44
O00370 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.07□□□□□ -1.44
O00370 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.07□□□□□ -1.44
O00370 AC079600.1-201ENST00000550326 297 ntBASIC6.07□□□□□ -1.44
O00370 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.07□□□□□ -1.44
O00370 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.07□□□□□ -1.44
O00370 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.07□□□□□ -1.44
O00370 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.07□□□□□ -1.44
O00370 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.07□□□□□ -1.44
O00370 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.07□□□□□ -1.44
O00370 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.07□□□□□ -1.44
O00370 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.07□□□□□ -1.44
O00370 AC002069.2-201ENST00000603580 883 ntBASIC6.07□□□□□ -1.44
O00370 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.07□□□□□ -1.44
O00370 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.07□□□□□ -1.44
O00370 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
O00370 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.07□□□□□ -1.44
O00370 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.07□□□□□ -1.44
O00370 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.07□□□□□ -1.44
O00370 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.07□□□□□ -1.44
O00370 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
O00370 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
O00370 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
O00370 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.07□□□□□ -1.44
O00370 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.07□□□□□ -1.44
O00370 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
O00370 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
O00370 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
O00370 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.06□□□□□ -1.44
O00370 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.06□□□□□ -1.44
O00370 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
O00370 OR13C1P-202ENST00000641378 2919 ntBASIC6.06□□□□□ -1.44
O00370 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.06□□□□□ -1.44
O00370 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
O00370 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
O00370 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.06□□□□□ -1.44
O00370 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.06□□□□□ -1.44
O00370 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.06□□□□□ -1.44
O00370 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.06□□□□□ -1.44
O00370 RNA5SP394-201ENST00000364216 119 ntBASIC6.06□□□□□ -1.44
O00370 RN7SKP69-201ENST00000365390 305 ntBASIC6.06□□□□□ -1.44
O00370 RN7SKP292-201ENST00000365522 317 ntBASIC6.06□□□□□ -1.44
O00370 RNA5SP30-201ENST00000365552 115 ntBASIC6.06□□□□□ -1.44
O00370 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC6.06□□□□□ -1.44
O00370 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
O00370 RPL11P3-201ENST00000395256 523 ntBASIC6.06□□□□□ -1.44
O00370 PEX12P1-201ENST00000400284 1048 ntBASIC6.06□□□□□ -1.44
O00370 HMGB1P20-201ENST00000402555 677 ntBASIC6.06□□□□□ -1.44
O00370 NENFP1-201ENST00000419476 466 ntBASIC6.06□□□□□ -1.44
O00370 AC093155.2-201ENST00000420734 937 ntBASIC6.06□□□□□ -1.44
O00370 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.06□□□□□ -1.44
O00370 AC079807.1-201ENST00000429993 481 ntBASIC6.06□□□□□ -1.44
O00370 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.06□□□□□ -1.44
O00370 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.06□□□□□ -1.44
O00370 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.06□□□□□ -1.44
O00370 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC6.06□□□□□ -1.44
O00370 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.06□□□□□ -1.44
O00370 RPS23P2-201ENST00000463671 415 ntBASIC6.06□□□□□ -1.44
O00370 RPL12P24-201ENST00000474907 486 ntBASIC6.06□□□□□ -1.44
O00370 RPS3AP15-201ENST00000483874 781 ntBASIC6.06□□□□□ -1.44
O00370 SNORD46.2-201ENST00000516021 102 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms