Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC28A1O00337 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.47□□□□□ -1.53
SLC28A1O00337 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC28A1O00337 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
SLC28A1O00337 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SLC28A1O00337 RNA5SP326-201ENST00000363209 110 ntBASIC5.47□□□□□ -1.53
SLC28A1O00337 RNA5SP232-201ENST00000364144 119 ntBASIC5.47□□□□□ -1.53
SLC28A1O00337 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SLC28A1O00337 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.47□□□□□ -1.53
SLC28A1O00337 AL354890.1-201ENST00000413730 346 ntBASIC5.47□□□□□ -1.53
SLC28A1O00337 MRPL53P1-201ENST00000414323 319 ntBASIC5.47□□□□□ -1.53
SLC28A1O00337 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC28A1O00337 AL034379.1-201ENST00000423216 253 ntBASIC5.47□□□□□ -1.53
SLC28A1O00337 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.47□□□□□ -1.53
SLC28A1O00337 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC28A1O00337 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.47□□□□□ -1.53
SLC28A1O00337 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SLC28A1O00337 PCBP2P1-201ENST00000437262 977 ntBASIC5.47□□□□□ -1.53
SLC28A1O00337 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.47□□□□□ -1.53
SLC28A1O00337 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.47□□□□□ -1.53
SLC28A1O00337 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC28A1O00337 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC28A1O00337 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.47□□□□□ -1.53
SLC28A1O00337 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC28A1O00337 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.47□□□□□ -1.53
SLC28A1O00337 OR4A17P-201ENST00000526032 904 ntBASIC5.47□□□□□ -1.53
SLC28A1O00337 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.47□□□□□ -1.53
SLC28A1O00337 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC28A1O00337 AL845552.1-201ENST00000556820 323 ntBASIC5.47□□□□□ -1.53
SLC28A1O00337 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.47□□□□□ -1.53
SLC28A1O00337 HMGN2P47-201ENST00000559378 272 ntBASIC5.47□□□□□ -1.53
SLC28A1O00337 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.47□□□□□ -1.53
SLC28A1O00337 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.47□□□□□ -1.53
SLC28A1O00337 ARGFXP2-201ENST00000579304 949 ntBASIC5.47□□□□□ -1.53
SLC28A1O00337 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC28A1O00337 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.47□□□□□ -1.53
SLC28A1O00337 FAM27E4-201ENST00000605259 342 ntBASIC5.47□□□□□ -1.53
SLC28A1O00337 AC138473.1-201ENST00000605717 526 ntBASIC5.47□□□□□ -1.53
SLC28A1O00337 AC107905.1-201ENST00000616204 426 ntBASIC5.47□□□□□ -1.53
SLC28A1O00337 AP000550.3-201ENST00000637734 379 ntBASIC5.47□□□□□ -1.53
SLC28A1O00337 AC007938.2-201ENST00000604666 2634 ntBASIC5.47□□□□□ -1.53
SLC28A1O00337 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.47□□□□□ -1.53
SLC28A1O00337 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.47□□□□□ -1.53
SLC28A1O00337 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC28A1O00337 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SLC28A1O00337 AC011503.2-201ENST00000594230 1500 ntBASIC5.47□□□□□ -1.53
SLC28A1O00337 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.47□□□□□ -1.53
SLC28A1O00337 AC083899.1-201ENST00000454465 3819 ntBASIC5.47□□□□□ -1.53
SLC28A1O00337 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.47□□□□□ -1.53
SLC28A1O00337 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC28A1O00337 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC28A1O00337 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
SLC28A1O00337 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SLC28A1O00337 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
SLC28A1O00337 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SLC28A1O00337 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.46□□□□□ -1.53
SLC28A1O00337 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.46□□□□□ -1.54
SLC28A1O00337 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SLC28A1O00337 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.46□□□□□ -1.54
SLC28A1O00337 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.46□□□□□ -1.54
SLC28A1O00337 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SLC28A1O00337 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SLC28A1O00337 RN7SKP145-201ENST00000363291 303 ntBASIC5.46□□□□□ -1.54
SLC28A1O00337 CDY17P-201ENST00000414121 1282 ntBASIC5.46□□□□□ -1.54
SLC28A1O00337 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.46□□□□□ -1.54
SLC28A1O00337 AL133482.1-201ENST00000415988 498 ntBASIC5.46□□□□□ -1.54
SLC28A1O00337 CDY8P-201ENST00000428380 1279 ntBASIC5.46□□□□□ -1.54
SLC28A1O00337 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.46□□□□□ -1.54
SLC28A1O00337 NANOGP9-201ENST00000439890 892 ntBASIC5.46□□□□□ -1.54
SLC28A1O00337 AL359265.1-201ENST00000440296 795 ntBASIC5.46□□□□□ -1.54
SLC28A1O00337 MED28P3-201ENST00000444288 531 ntBASIC5.46□□□□□ -1.54
SLC28A1O00337 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.46□□□□□ -1.54
SLC28A1O00337 CDY20P-201ENST00000447528 1279 ntBASIC5.46□□□□□ -1.54
SLC28A1O00337 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.46□□□□□ -1.54
SLC28A1O00337 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SLC28A1O00337 AC073476.1-201ENST00000452854 407 ntBASIC5.46□□□□□ -1.54
SLC28A1O00337 CST12P-201ENST00000457644 362 ntBASIC5.46□□□□□ -1.54
SLC28A1O00337 AC068228.1-201ENST00000461723 211 ntBASIC5.46□□□□□ -1.54
SLC28A1O00337 AC073610.1-201ENST00000489971 396 ntBASIC5.46□□□□□ -1.54
SLC28A1O00337 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
SLC28A1O00337 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.46□□□□□ -1.54
SLC28A1O00337 RNA5SP340-201ENST00000517132 107 ntBASIC5.46□□□□□ -1.54
SLC28A1O00337 AC021678.3-201ENST00000517893 476 ntBASIC5.46□□□□□ -1.54
SLC28A1O00337 NPM1P52-201ENST00000518264 846 ntBASIC5.46□□□□□ -1.54
SLC28A1O00337 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.46□□□□□ -1.54
SLC28A1O00337 PMS2P3-207ENST00000529061 717 ntBASIC5.46□□□□□ -1.54
SLC28A1O00337 HMGN2P36-201ENST00000529541 409 ntBASIC5.46□□□□□ -1.54
SLC28A1O00337 OR4A43P-201ENST00000532938 908 ntBASIC5.46□□□□□ -1.54
SLC28A1O00337 AC122688.1-201ENST00000541494 223 ntBASIC5.46□□□□□ -1.54
SLC28A1O00337 AL139124.1-201ENST00000609123 421 ntBASIC5.46□□□□□ -1.54
SLC28A1O00337 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.46□□□□□ -1.54
SLC28A1O00337 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.46□□□□□ -1.54
SLC28A1O00337 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SLC28A1O00337 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.46□□□□□ -1.54
SLC28A1O00337 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.46□□□□□ -1.54
SLC28A1O00337 AC109446.4-201ENST00000623235 2755 ntBASIC5.46□□□□□ -1.54
SLC28A1O00337 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SLC28A1O00337 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SLC28A1O00337 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.46□□□□□ -1.54
SLC28A1O00337 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms