Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.35□□□□□ -1.55
NPIPA3F8WFD2 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.35□□□□□ -1.55
NPIPA3F8WFD2 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.35□□□□□ -1.55
NPIPA3F8WFD2 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.35□□□□□ -1.55
NPIPA3F8WFD2 AC116158.1-201ENST00000560231 2129 ntBASIC5.35□□□□□ -1.55
NPIPA3F8WFD2 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA3F8WFD2 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA3F8WFD2 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 AC022164.1-201ENST00000568767 2673 ntBASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 RNU6-697P-201ENST00000363348 107 ntBASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 NPM1P10-201ENST00000398310 865 ntBASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 SDHDP6-201ENST00000414693 480 ntBASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 DPPA2P2-201ENST00000418220 897 ntBASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 ARAFP1-201ENST00000422172 605 ntBASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 AC099677.3-201ENST00000427081 395 ntBASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 AL365220.1-201ENST00000432923 399 ntBASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 AL445928.1-201ENST00000435545 222 ntBASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 DNAJC19P5-201ENST00000443295 316 ntBASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 RPS7P3-201ENST00000443360 580 ntBASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 AC023141.9-201ENST00000458734 412 ntBASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 RPSAP39-201ENST00000467439 883 ntBASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 AC074386.1-201ENST00000476560 767 ntBASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 AC093827.1-201ENST00000480094 861 ntBASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 RN7SL214P-201ENST00000487317 265 ntBASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 AC109481.1-201ENST00000509173 282 ntBASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 TMEM97P2-201ENST00000517841 403 ntBASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 AC091078.2-201ENST00000557145 559 ntBASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 QTRT1P1-201ENST00000604344 1078 ntBASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NPIPA3F8WFD2 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
NPIPA3F8WFD2 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
NPIPA3F8WFD2 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
NPIPA3F8WFD2 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 AC083799.1-201ENST00000366451 910 ntBASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 OR7E101P-201ENST00000400428 513 ntBASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 AC099521.1-201ENST00000482557 334 ntBASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 ATG10-AS1-201ENST00000504846 648 ntBASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 RNU6-362P-201ENST00000516736 90 ntBASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 AC005000.1-201ENST00000536192 288 ntBASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 MIR4420-201ENST00000583944 77 ntBASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 AC022387.2-201ENST00000604050 448 ntBASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 RNU6-84P-201ENST00000607737 102 ntBASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.33□□□□□ -1.56
NPIPA3F8WFD2 AL352984.2-202ENST00000613699 155 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms