Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 AL365220.1-201ENST00000432923 399 ntBASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 AL445928.1-201ENST00000435545 222 ntBASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 RPS7P3-201ENST00000443360 580 ntBASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 AC073072.2-201ENST00000447425 348 ntBASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 MTND4LP12-201ENST00000448237 295 ntBASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 SEPT14P1-201ENST00000458703 648 ntBASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 AC023141.9-201ENST00000458734 412 ntBASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 RPSAP39-201ENST00000467439 883 ntBASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 AC074386.1-201ENST00000476560 767 ntBASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 RN7SL214P-201ENST00000487317 265 ntBASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 AP001960.1-201ENST00000506494 658 ntBASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 AC109481.1-201ENST00000509173 282 ntBASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 SNORA70.11-201ENST00000515987 138 ntBASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 SNORA70.13-201ENST00000516116 138 ntBASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 TMEM97P2-201ENST00000517841 403 ntBASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 OR4A42P-201ENST00000531397 938 ntBASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 AC091078.2-201ENST00000557145 559 ntBASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
NPIPA2E9PIF3 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
NPIPA2E9PIF3 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
NPIPA2E9PIF3 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 OR7E101P-201ENST00000400428 513 ntBASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 RN7SL72P-201ENST00000460697 269 ntBASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 AC099521.1-201ENST00000482557 334 ntBASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 AC016687.1-201ENST00000482574 353 ntBASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 AC091544.1-201ENST00000484702 348 ntBASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
NPIPA2E9PIF3 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 OR2AT2P-201ENST00000413438 905 ntBASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 RPL34P3-201ENST00000421454 338 ntBASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 AL034379.1-201ENST00000423216 253 ntBASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 SUMO2P3-201ENST00000438311 288 ntBASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 SDC4P-201ENST00000453285 601 ntBASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 PFN1P6-201ENST00000476786 399 ntBASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 AL136038.1-201ENST00000497246 351 ntBASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.32□□□□□ -1.56
NPIPA2E9PIF3 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms