Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AL133481.2-203ENST00000607558 139 ntBASIC6.15□□□□□ -1.42
HMGB1P1B2RPK0 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC6.15□□□□□ -1.42
HMGB1P1B2RPK0 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.15□□□□□ -1.42
HMGB1P1B2RPK0 AC004808.2-201ENST00000627965 773 ntBASIC6.15□□□□□ -1.42
HMGB1P1B2RPK0 HBG1-202ENST00000632727 369 ntTSL 3 BASIC6.15□□□□□ -1.42
HMGB1P1B2RPK0 AC103703.1-201ENST00000634783 663 ntBASIC6.15□□□□□ -1.42
HMGB1P1B2RPK0 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HMGB1P1B2RPK0 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HMGB1P1B2RPK0 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HMGB1P1B2RPK0 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
HMGB1P1B2RPK0 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HMGB1P1B2RPK0 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HMGB1P1B2RPK0 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HMGB1P1B2RPK0 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
HMGB1P1B2RPK0 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.15□□□□□ -1.43
HMGB1P1B2RPK0 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 AC130304.1-201ENST00000622942 2385 ntBASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 RNFT1P3-201ENST00000340898 1052 ntBASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 RNA5SP187-201ENST00000384400 119 ntBASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 MYL6P5-201ENST00000412707 459 ntBASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 OR13Z1P-201ENST00000416141 834 ntBASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 AC109638.1-201ENST00000417406 326 ntBASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 TRGV6-201ENST00000417928 299 ntBASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 MARK2P12-201ENST00000420129 585 ntBASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 CBX1P4-201ENST00000439415 457 ntBASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 RPS16P9-201ENST00000477220 427 ntBASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 PDCL3P1-201ENST00000534575 734 ntBASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 AC005229.3-201ENST00000603438 323 ntBASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 AC025175.1-201ENST00000606482 759 ntBASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 AL355802.4-201ENST00000607635 548 ntBASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 RN7SL261P-201ENST00000613441 282 ntBASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 AC007786.3-201ENST00000615154 596 ntBASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 RAB28P4-201ENST00000622233 665 ntBASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 AC096656.1-201ENST00000623826 1364 ntBASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 AC018717.1-201ENST00000457712 1505 ntBASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.14□□□□□ -1.43
HMGB1P1B2RPK0 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 AP001029.2-203ENST00000589795 4910 ntBASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 AC107977.1-201ENST00000355745 939 ntBASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 SNORD94-201ENST00000386037 137 ntBASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 SEC63P1-201ENST00000425785 1258 ntBASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 AL138785.1-201ENST00000425821 331 ntBASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 AC083862.1-201ENST00000427378 1242 ntBASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 AL136231.1-201ENST00000429407 730 ntBASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 UOX-201ENST00000471089 899 ntBASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 OR9N1P-202ENST00000494289 481 ntBASIC6.13□□□□□ -1.43
HMGB1P1B2RPK0 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms