Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC66A2RUB6 OR10R1P-201ENST00000441524 1141 ntBASIC6.85□□□□□ -1.31
CCDC66A2RUB6 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC66A2RUB6 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.85□□□□□ -1.31
CCDC66A2RUB6 RBMY2EP-202ENST00000456360 940 ntBASIC6.85□□□□□ -1.31
CCDC66A2RUB6 SNX18P26-201ENST00000458433 740 ntBASIC6.85□□□□□ -1.31
CCDC66A2RUB6 AC093719.1-201ENST00000480427 441 ntBASIC6.85□□□□□ -1.31
CCDC66A2RUB6 SYT14P1-201ENST00000481459 721 ntBASIC6.85□□□□□ -1.31
CCDC66A2RUB6 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.85□□□□□ -1.31
CCDC66A2RUB6 AC114940.1-201ENST00000512162 1265 ntBASIC6.85□□□□□ -1.31
CCDC66A2RUB6 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.85□□□□□ -1.31
CCDC66A2RUB6 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC6.85□□□□□ -1.31
CCDC66A2RUB6 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC6.85□□□□□ -1.31
CCDC66A2RUB6 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.85□□□□□ -1.31
CCDC66A2RUB6 AL356801.1-201ENST00000559320 294 ntBASIC6.85□□□□□ -1.31
CCDC66A2RUB6 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.85□□□□□ -1.31
CCDC66A2RUB6 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC6.85□□□□□ -1.31
CCDC66A2RUB6 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.85□□□□□ -1.31
CCDC66A2RUB6 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC6.85□□□□□ -1.31
CCDC66A2RUB6 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CCDC66A2RUB6 AC016839.1-201ENST00000578162 867 ntBASIC6.85□□□□□ -1.31
CCDC66A2RUB6 AC073387.2-201ENST00000604797 784 ntBASIC6.85□□□□□ -1.31
CCDC66A2RUB6 AL022394.1-201ENST00000606979 292 ntBASIC6.85□□□□□ -1.31
CCDC66A2RUB6 AC092954.1-201ENST00000609121 445 ntBASIC6.85□□□□□ -1.31
CCDC66A2RUB6 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
CCDC66A2RUB6 AL035461.2-201ENST00000619201 524 ntBASIC6.85□□□□□ -1.31
CCDC66A2RUB6 AC061999.1-201ENST00000624454 177 ntBASIC6.85□□□□□ -1.31
CCDC66A2RUB6 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.85□□□□□ -1.31
CCDC66A2RUB6 CASC19-274ENST00000642018 970 ntBASIC6.85□□□□□ -1.31
CCDC66A2RUB6 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.85□□□□□ -1.31
CCDC66A2RUB6 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
CCDC66A2RUB6 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.85□□□□□ -1.31
CCDC66A2RUB6 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.85□□□□□ -1.31
CCDC66A2RUB6 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC66A2RUB6 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC66A2RUB6 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC66A2RUB6 SHQ1P1-201ENST00000437111 1544 ntBASIC6.85□□□□□ -1.31
CCDC66A2RUB6 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC66A2RUB6 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC66A2RUB6 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC66A2RUB6 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC66A2RUB6 PARP4P2-201ENST00000446672 3326 ntBASIC6.84□□□□□ -1.31
CCDC66A2RUB6 AL359715.4-201ENST00000606629 1436 ntBASIC6.84□□□□□ -1.31
CCDC66A2RUB6 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.84□□□□□ -1.31
CCDC66A2RUB6 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.84□□□□□ -1.31
CCDC66A2RUB6 RNU4-28P-201ENST00000364739 141 ntBASIC6.84□□□□□ -1.31
CCDC66A2RUB6 RNA5SP152-201ENST00000365184 110 ntBASIC6.84□□□□□ -1.31
CCDC66A2RUB6 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.84□□□□□ -1.31
CCDC66A2RUB6 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 AL445183.3-201ENST00000414168 502 ntBASIC6.84□□□□□ -1.31
CCDC66A2RUB6 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 DEFB130D-201ENST00000426866 237 ntBASIC6.84□□□□□ -1.31
CCDC66A2RUB6 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 RPS6P15-201ENST00000431996 751 ntBASIC6.84□□□□□ -1.31
CCDC66A2RUB6 MTCYBP29-201ENST00000436327 1006 ntBASIC6.84□□□□□ -1.31
CCDC66A2RUB6 SNRPFP2-201ENST00000440710 251 ntBASIC6.84□□□□□ -1.31
CCDC66A2RUB6 OR2L9P-201ENST00000444456 913 ntBASIC6.84□□□□□ -1.31
CCDC66A2RUB6 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 AP000563.1-201ENST00000490865 758 ntBASIC6.84□□□□□ -1.31
CCDC66A2RUB6 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 AC147055.3-201ENST00000510547 851 ntBASIC6.84□□□□□ -1.31
CCDC66A2RUB6 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 AC008429.2-201ENST00000523057 864 ntBASIC6.84□□□□□ -1.31
CCDC66A2RUB6 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 AC233702.7-202ENST00000582941 211 ntBASIC6.84□□□□□ -1.31
CCDC66A2RUB6 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 OR7E19P-202ENST00000589942 844 ntBASIC6.84□□□□□ -1.31
CCDC66A2RUB6 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 AC022001.1-201ENST00000605193 268 ntBASIC6.84□□□□□ -1.31
CCDC66A2RUB6 AC093635.1-201ENST00000609028 555 ntBASIC6.84□□□□□ -1.31
CCDC66A2RUB6 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC6.84□□□□□ -1.31
CCDC66A2RUB6 AC007671.1-201ENST00000616957 830 ntBASIC6.84□□□□□ -1.31
CCDC66A2RUB6 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC66A2RUB6 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms