Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 RN7SKP278-201ENST00000410504 342 ntBASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 RPSAP35-201ENST00000413753 818 ntBASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 H3F3BP1-201ENST00000440551 403 ntBASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 RPS4XP1-201ENST00000482189 787 ntBASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 AC008638.1-201ENST00000506035 866 ntBASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 PGAM1P13-201ENST00000507497 754 ntBASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 GAPDHP62-201ENST00000515313 990 ntBASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 AP001267.4-201ENST00000602598 545 ntBASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 AC069542.2-201ENST00000624816 216 ntBASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 AC137056.2-201ENST00000624055 1958 ntBASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 MAPK10-261ENST00000641050 3109 ntBASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 RNU4-64P-201ENST00000410795 131 ntBASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 AP000534.2-201ENST00000412729 568 ntBASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 AL133325.1-201ENST00000421090 382 ntBASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 OR10T1P-201ENST00000424327 947 ntBASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 SNORD125-201ENST00000459538 96 ntBASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 RPS17P5-201ENST00000498293 408 ntBASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 ST13P12-201ENST00000508958 1094 ntBASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 LDHBP3-201ENST00000514909 822 ntBASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 IGLV2-28-201ENST00000520681 304 ntBASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 OR5AM1P-201ENST00000532136 1032 ntBASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 AC122688.1-201ENST00000541494 223 ntBASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 AP005403.1-201ENST00000579720 229 ntBASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 AL512329.2-201ENST00000607350 548 ntBASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 AC021766.1-201ENST00000624404 741 ntBASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 AL592429.1-201ENST00000403909 1473 ntBASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 KYNUP3-201ENST00000574386 1341 ntBASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
SMIM28A0A1B0GU29 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 PABPC1P6-201ENST00000445594 1829 ntBASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 AC093829.1-201ENST00000506662 1618 ntBASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 MAPK10-270ENST00000641102 3538 ntBASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 AC104964.3-201ENST00000606115 2860 ntBASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 MIR133B-201ENST00000362210 119 ntBASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 MTND4LP17-201ENST00000414607 293 ntBASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 SRSF1P1-201ENST00000424058 520 ntBASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 PRUNEP1-201ENST00000425846 705 ntBASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 AZGP1P2-201ENST00000454506 345 ntBASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 AC026348.1-201ENST00000462549 1053 ntBASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 RN7SL799P-201ENST00000475891 298 ntBASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 RPL7P39-201ENST00000481157 744 ntBASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 RPEP1-201ENST00000504507 658 ntBASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 AC007448.1-201ENST00000582714 234 ntBASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 AC013244.1-201ENST00000604279 193 ntBASIC5.92□□□□□ -1.46
SMIM28A0A1B0GU29 SDR42E1P1-201ENST00000611327 477 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms