Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.09□□□□□ -1.59
COPS3Q9UNS2 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COPS3Q9UNS2 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.09□□□□□ -1.59
COPS3Q9UNS2 AC139697.1-201ENST00000548429 745 ntBASIC5.09□□□□□ -1.59
COPS3Q9UNS2 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.09□□□□□ -1.59
COPS3Q9UNS2 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.09□□□□□ -1.59
COPS3Q9UNS2 AC010547.7-201ENST00000570323 333 ntBASIC5.09□□□□□ -1.59
COPS3Q9UNS2 RN7SL230P-201ENST00000580835 303 ntBASIC5.09□□□□□ -1.59
COPS3Q9UNS2 NANOGP3-201ENST00000605855 286 ntBASIC5.09□□□□□ -1.59
COPS3Q9UNS2 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.09□□□□□ -1.59
COPS3Q9UNS2 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.09□□□□□ -1.59
COPS3Q9UNS2 MIR6809-201ENST00000612189 116 ntBASIC5.09□□□□□ -1.59
COPS3Q9UNS2 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.09□□□□□ -1.59
COPS3Q9UNS2 uc_338.29-201ENST00000615099 168 ntBASIC5.09□□□□□ -1.59
COPS3Q9UNS2 MIR6133-201ENST00000617057 108 ntBASIC5.09□□□□□ -1.59
COPS3Q9UNS2 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COPS3Q9UNS2 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COPS3Q9UNS2 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COPS3Q9UNS2 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COPS3Q9UNS2 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COPS3Q9UNS2 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
COPS3Q9UNS2 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
COPS3Q9UNS2 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 AC007342.5-201ENST00000571340 2142 ntBASIC5.08□□□□□ -1.6
COPS3Q9UNS2 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 AL929601.4-201ENST00000613011 1341 ntBASIC5.08□□□□□ -1.6
COPS3Q9UNS2 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 SETP15-201ENST00000412724 337 ntBASIC5.08□□□□□ -1.6
COPS3Q9UNS2 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 DEFA9P-201ENST00000433042 285 ntBASIC5.08□□□□□ -1.6
COPS3Q9UNS2 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 OR52I1-201ENST00000450052 1050 ntBASIC5.08□□□□□ -1.6
COPS3Q9UNS2 MEMO1P4-201ENST00000453590 386 ntBASIC5.08□□□□□ -1.6
COPS3Q9UNS2 RN7SL254P-201ENST00000460609 284 ntBASIC5.08□□□□□ -1.6
COPS3Q9UNS2 AC092865.4-201ENST00000477936 615 ntBASIC5.08□□□□□ -1.6
COPS3Q9UNS2 AC044810.1-201ENST00000480271 711 ntBASIC5.08□□□□□ -1.6
COPS3Q9UNS2 RPS27P20-201ENST00000492051 246 ntBASIC5.08□□□□□ -1.6
COPS3Q9UNS2 OR2A3P-201ENST00000493774 953 ntBASIC5.08□□□□□ -1.6
COPS3Q9UNS2 RN7SL362P-201ENST00000494228 267 ntBASIC5.08□□□□□ -1.6
COPS3Q9UNS2 RPS17P5-201ENST00000498293 408 ntBASIC5.08□□□□□ -1.6
COPS3Q9UNS2 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 AC113367.2-201ENST00000505749 160 ntBASIC5.08□□□□□ -1.6
COPS3Q9UNS2 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 RN7SKP35-201ENST00000517210 151 ntBASIC5.08□□□□□ -1.6
COPS3Q9UNS2 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 DHFRP1-201ENST00000579682 559 ntBASIC5.08□□□□□ -1.6
COPS3Q9UNS2 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 AC008507.3-201ENST00000585753 472 ntBASIC5.08□□□□□ -1.6
COPS3Q9UNS2 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 AC007786.3-201ENST00000615154 596 ntBASIC5.08□□□□□ -1.6
COPS3Q9UNS2 AL122125.1-201ENST00000616999 600 ntBASIC5.08□□□□□ -1.6
COPS3Q9UNS2 MIR6813-201ENST00000621638 56 ntBASIC5.08□□□□□ -1.6
COPS3Q9UNS2 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 AC092376.2-201ENST00000622621 4116 ntBASIC5.08□□□□□ -1.6
COPS3Q9UNS2 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
COPS3Q9UNS2 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COPS3Q9UNS2 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COPS3Q9UNS2 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
COPS3Q9UNS2 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.07□□□□□ -1.6
COPS3Q9UNS2 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
COPS3Q9UNS2 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.07□□□□□ -1.6
COPS3Q9UNS2 SSXP3-201ENST00000442971 1300 ntBASIC5.07□□□□□ -1.6
COPS3Q9UNS2 AC007938.2-201ENST00000604666 2634 ntBASIC5.07□□□□□ -1.6
COPS3Q9UNS2 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
COPS3Q9UNS2 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COPS3Q9UNS2 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
COPS3Q9UNS2 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COPS3Q9UNS2 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms