Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 Z83820.1-201ENST00000456978 1499 ntBASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 AL359715.3-201ENST00000569267 2123 ntBASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 EEF1A1P30-201ENST00000429708 1315 ntBASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 AC068870.1-201ENST00000563737 2455 ntBASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC7.48□□□□□ -1.21
NPC1L1Q9UHC9 MIR133B-201ENST00000362210 119 ntBASIC7.47□□□□□ -1.21
NPC1L1Q9UHC9 RNU4-2-201ENST00000365668 141 ntBASIC7.47□□□□□ -1.21
NPC1L1Q9UHC9 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
NPC1L1Q9UHC9 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NPC1L1Q9UHC9 RPL7P56-201ENST00000429441 717 ntBASIC7.47□□□□□ -1.21
NPC1L1Q9UHC9 AL163193.1-201ENST00000444895 788 ntBASIC7.47□□□□□ -1.21
NPC1L1Q9UHC9 IGBP1P3-201ENST00000447449 1000 ntBASIC7.47□□□□□ -1.21
NPC1L1Q9UHC9 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC7.47□□□□□ -1.21
NPC1L1Q9UHC9 AC078878.1-201ENST00000539832 958 ntBASIC7.47□□□□□ -1.21
NPC1L1Q9UHC9 OR11H3P-201ENST00000554547 982 ntBASIC7.47□□□□□ -1.21
NPC1L1Q9UHC9 AC135068.5-201ENST00000624197 983 ntBASIC7.47□□□□□ -1.21
NPC1L1Q9UHC9 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC7.47□□□□□ -1.21
NPC1L1Q9UHC9 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC7.47□□□□□ -1.21
NPC1L1Q9UHC9 AC138907.8-201ENST00000623981 2256 ntBASIC7.47□□□□□ -1.21
NPC1L1Q9UHC9 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NPC1L1Q9UHC9 AC078880.4-201ENST00000617627 1749 ntBASIC7.47□□□□□ -1.21
NPC1L1Q9UHC9 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NPC1L1Q9UHC9 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
NPC1L1Q9UHC9 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NPC1L1Q9UHC9 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NPC1L1Q9UHC9 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC7.47□□□□□ -1.21
NPC1L1Q9UHC9 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC7.47□□□□□ -1.21
NPC1L1Q9UHC9 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NPC1L1Q9UHC9 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 RN7SKP160-201ENST00000363804 340 ntBASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 RNA5SP335-201ENST00000363817 110 ntBASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 MIR105-2-201ENST00000385083 81 ntBASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 RNA5SP339-201ENST00000390987 122 ntBASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 RPL12P17-201ENST00000432393 498 ntBASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 COPS8P2-201ENST00000473228 627 ntBASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 EIF3LP3-201ENST00000495197 822 ntBASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 IGLCOR22-2-201ENST00000605398 313 ntBASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 AC100757.1-201ENST00000616872 1835 ntBASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC7.46□□□□□ -1.21
NPC1L1Q9UHC9 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
NPC1L1Q9UHC9 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
NPC1L1Q9UHC9 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
NPC1L1Q9UHC9 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC7.46□□□□□ -1.22
NPC1L1Q9UHC9 AL355433.1-201ENST00000422804 300 ntBASIC7.46□□□□□ -1.22
NPC1L1Q9UHC9 SRSF1P1-201ENST00000424058 520 ntBASIC7.46□□□□□ -1.22
NPC1L1Q9UHC9 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC7.46□□□□□ -1.22
NPC1L1Q9UHC9 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC7.46□□□□□ -1.22
NPC1L1Q9UHC9 RN7SL799P-201ENST00000475891 298 ntBASIC7.46□□□□□ -1.22
NPC1L1Q9UHC9 PPP1R11P1-201ENST00000486095 376 ntBASIC7.46□□□□□ -1.22
NPC1L1Q9UHC9 HMGB1P44-201ENST00000508597 572 ntBASIC7.46□□□□□ -1.22
NPC1L1Q9UHC9 IGKV2-18-201ENST00000522607 343 ntBASIC7.46□□□□□ -1.22
NPC1L1Q9UHC9 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC7.46□□□□□ -1.22
NPC1L1Q9UHC9 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.46□□□□□ -1.22
NPC1L1Q9UHC9 BLZF2P-201ENST00000553776 1130 ntBASIC7.46□□□□□ -1.22
NPC1L1Q9UHC9 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
NPC1L1Q9UHC9 SUGT1P3-202ENST00000604259 383 ntBASIC7.46□□□□□ -1.22
NPC1L1Q9UHC9 AC211433.2-201ENST00000608433 387 ntBASIC7.46□□□□□ -1.22
NPC1L1Q9UHC9 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC7.46□□□□□ -1.22
NPC1L1Q9UHC9 AC021766.1-201ENST00000624404 741 ntBASIC7.46□□□□□ -1.22
NPC1L1Q9UHC9 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 AC114774.1-201ENST00000507410 1770 ntBASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 AC025470.1-201ENST00000510053 2032 ntBASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
NPC1L1Q9UHC9 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms