Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RPS26P39-201ENST00000469206 341 ntBASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 CR383656.1-201ENST00000484916 377 ntBASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 AC090022.1-201ENST00000546569 311 ntBASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 DPPA3P2-202ENST00000557188 1219 ntBASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 RBM22P12-201ENST00000567098 1255 ntBASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 MIR4420-201ENST00000583944 77 ntBASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 AC069542.2-201ENST00000624816 216 ntBASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 AL022311.1-201ENST00000623726 19416 ntBASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 AL391361.1-201ENST00000405580 489 ntBASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 AL133173.1-201ENST00000423458 397 ntBASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 VN1R21P-201ENST00000426703 765 ntBASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 AL450023.1-201ENST00000450868 751 ntBASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 LDHBP2-201ENST00000456969 1005 ntBASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 DUTP1-201ENST00000493631 470 ntBASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 DUTP7-201ENST00000507982 486 ntBASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 AC093815.1-201ENST00000508637 280 ntBASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 snoU109.5-201ENST00000516231 132 ntBASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 AC021733.2-201ENST00000518830 497 ntBASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 PPATP2-201ENST00000605635 508 ntBASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 AL512624.1-201ENST00000613638 469 ntBASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLCF1Q9UBD9 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLCF1Q9UBD9 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
CLCF1Q9UBD9 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLCF1Q9UBD9 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.05□□□□□ -1.6
CLCF1Q9UBD9 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLCF1Q9UBD9 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLCF1Q9UBD9 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLCF1Q9UBD9 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLCF1Q9UBD9 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CLCF1Q9UBD9 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLCF1Q9UBD9 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLCF1Q9UBD9 HCFC2P1-201ENST00000392864 1592 ntBASIC5.05□□□□□ -1.6
CLCF1Q9UBD9 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.05□□□□□ -1.6
CLCF1Q9UBD9 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLCF1Q9UBD9 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
CLCF1Q9UBD9 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLCF1Q9UBD9 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.05□□□□□ -1.6
CLCF1Q9UBD9 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CLCF1Q9UBD9 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
CLCF1Q9UBD9 RNU1-59P-201ENST00000364829 162 ntBASIC5.05□□□□□ -1.6
CLCF1Q9UBD9 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.05□□□□□ -1.6
CLCF1Q9UBD9 CRIP1P1-201ENST00000427567 185 ntBASIC5.05□□□□□ -1.6
CLCF1Q9UBD9 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.05□□□□□ -1.6
CLCF1Q9UBD9 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.05□□□□□ -1.6
CLCF1Q9UBD9 AC012075.1-201ENST00000436549 580 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms