Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.49□□□□□ -1.53
CNIH4Q9P003 AC093297.3-201ENST00000607056 2517 ntBASIC5.49□□□□□ -1.53
CNIH4Q9P003 AF287957.1-201ENST00000607368 1595 ntBASIC5.49□□□□□ -1.53
CNIH4Q9P003 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CNIH4Q9P003 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CNIH4Q9P003 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CNIH4Q9P003 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CNIH4Q9P003 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CNIH4Q9P003 THAP12P9-201ENST00000503971 2360 ntBASIC5.49□□□□□ -1.53
CNIH4Q9P003 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CNIH4Q9P003 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.49□□□□□ -1.53
CNIH4Q9P003 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.49□□□□□ -1.53
CNIH4Q9P003 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
CNIH4Q9P003 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNIH4Q9P003 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CNIH4Q9P003 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CNIH4Q9P003 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNIH4Q9P003 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
CNIH4Q9P003 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CNIH4Q9P003 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNIH4Q9P003 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.48□□□□□ -1.53
CNIH4Q9P003 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.48□□□□□ -1.53
CNIH4Q9P003 AC010132.2-201ENST00000295493 1043 ntBASIC5.48□□□□□ -1.53
CNIH4Q9P003 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNIH4Q9P003 RNA5SP273-201ENST00000362484 113 ntBASIC5.48□□□□□ -1.53
CNIH4Q9P003 RN7SKP128-201ENST00000364270 303 ntBASIC5.48□□□□□ -1.53
CNIH4Q9P003 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.48□□□□□ -1.53
CNIH4Q9P003 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.48□□□□□ -1.53
CNIH4Q9P003 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CNIH4Q9P003 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNIH4Q9P003 AL096711.1-201ENST00000404780 554 ntBASIC5.48□□□□□ -1.53
CNIH4Q9P003 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.48□□□□□ -1.53
CNIH4Q9P003 SLC20A1P1-201ENST00000413906 956 ntBASIC5.48□□□□□ -1.53
CNIH4Q9P003 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.48□□□□□ -1.53
CNIH4Q9P003 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.48□□□□□ -1.53
CNIH4Q9P003 AL035660.1-201ENST00000422041 222 ntBASIC5.48□□□□□ -1.53
CNIH4Q9P003 KIF4CP-201ENST00000422742 1279 ntBASIC5.48□□□□□ -1.53
CNIH4Q9P003 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.48□□□□□ -1.53
CNIH4Q9P003 MGAT2P2-201ENST00000427194 797 ntBASIC5.48□□□□□ -1.53
CNIH4Q9P003 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.48□□□□□ -1.53
CNIH4Q9P003 MAPRE1P3-201ENST00000435438 796 ntBASIC5.48□□□□□ -1.53
CNIH4Q9P003 Z84478.1-201ENST00000438230 1219 ntBASIC5.48□□□□□ -1.53
CNIH4Q9P003 REG1CP-206ENST00000447469 496 ntBASIC5.48□□□□□ -1.53
CNIH4Q9P003 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CNIH4Q9P003 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.48□□□□□ -1.53
CNIH4Q9P003 AC144530.1-201ENST00000452862 555 ntBASIC5.48□□□□□ -1.53
CNIH4Q9P003 RN7SL269P-201ENST00000467795 305 ntBASIC5.48□□□□□ -1.53
CNIH4Q9P003 AC090058.1-201ENST00000498788 435 ntBASIC5.48□□□□□ -1.53
CNIH4Q9P003 AC008629.2-201ENST00000503783 483 ntBASIC5.48□□□□□ -1.53
CNIH4Q9P003 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.48□□□□□ -1.53
CNIH4Q9P003 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.48□□□□□ -1.53
CNIH4Q9P003 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.48□□□□□ -1.53
CNIH4Q9P003 Y_RNA.667-201ENST00000516212 107 ntBASIC5.48□□□□□ -1.53
CNIH4Q9P003 RNA5SP438-201ENST00000516561 112 ntBASIC5.48□□□□□ -1.53
CNIH4Q9P003 AP004609.2-201ENST00000532177 190 ntBASIC5.48□□□□□ -1.53
CNIH4Q9P003 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
CNIH4Q9P003 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNIH4Q9P003 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.48□□□□□ -1.53
CNIH4Q9P003 AC009268.1-201ENST00000561352 1203 ntBASIC5.48□□□□□ -1.53
CNIH4Q9P003 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.48□□□□□ -1.53
CNIH4Q9P003 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.48□□□□□ -1.53
CNIH4Q9P003 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.48□□□□□ -1.53
CNIH4Q9P003 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CNIH4Q9P003 AC015722.2-201ENST00000622210 551 ntBASIC5.48□□□□□ -1.53
CNIH4Q9P003 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.48□□□□□ -1.53
CNIH4Q9P003 AC000095.2-202ENST00000637415 154 ntBASIC5.48□□□□□ -1.53
CNIH4Q9P003 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CNIH4Q9P003 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CNIH4Q9P003 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
CNIH4Q9P003 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CNIH4Q9P003 AC138907.8-201ENST00000623981 2256 ntBASIC5.48□□□□□ -1.53
CNIH4Q9P003 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.48□□□□□ -1.53
CNIH4Q9P003 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CNIH4Q9P003 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CNIH4Q9P003 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CNIH4Q9P003 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
CNIH4Q9P003 AC097063.1-201ENST00000426714 1797 ntBASIC5.47□□□□□ -1.53
CNIH4Q9P003 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.47□□□□□ -1.53
CNIH4Q9P003 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
CNIH4Q9P003 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CNIH4Q9P003 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CNIH4Q9P003 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CNIH4Q9P003 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CNIH4Q9P003 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CNIH4Q9P003 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CNIH4Q9P003 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
CNIH4Q9P003 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CNIH4Q9P003 SELENOWP1-201ENST00000322792 252 ntBASIC5.47□□□□□ -1.53
CNIH4Q9P003 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CNIH4Q9P003 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.47□□□□□ -1.53
CNIH4Q9P003 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CNIH4Q9P003 MIR7-1-201ENST00000384871 110 ntBASIC5.47□□□□□ -1.53
CNIH4Q9P003 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
CNIH4Q9P003 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.47□□□□□ -1.53
CNIH4Q9P003 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.47□□□□□ -1.53
CNIH4Q9P003 AC013470.3-201ENST00000420252 1194 ntBASIC5.47□□□□□ -1.53
CNIH4Q9P003 MTND4LP13-201ENST00000425022 298 ntBASIC5.47□□□□□ -1.53
CNIH4Q9P003 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CNIH4Q9P003 AC099677.3-201ENST00000427081 395 ntBASIC5.47□□□□□ -1.53
CNIH4Q9P003 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms