Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC090241.1-201ENST00000587732 621 ntBASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 AC012488.1-201ENST00000611221 640 ntBASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 TEX41-279ENST00000629149 609 ntTSL 5 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 MIR6863-201ENST00000636112 90 ntBASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 CCT4P2-201ENST00000233836 1548 ntBASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 AL590763.1-201ENST00000398297 1545 ntBASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CUEDC1Q9NWM3 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 MAPK10-347ENST00000641762 2856 ntBASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 U3.1-201ENST00000362500 215 ntBASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 SNORA30B-201ENST00000365319 129 ntBASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 YWHAZP3-201ENST00000415292 738 ntBASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 MTND3P2-201ENST00000438452 342 ntBASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 OR6C5P-201ENST00000452388 923 ntBASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 AC093166.4-201ENST00000457867 318 ntBASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 AC234782.3-201ENST00000461229 433 ntBASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 RN7SL213P-201ENST00000463482 317 ntBASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 AC007537.2-201ENST00000472093 511 ntBASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 RPS29P25-201ENST00000481709 171 ntBASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 NDUFS5P2-201ENST00000484004 306 ntBASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 CREM-234ENST00000484283 660 ntTSL 5 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 AC127024.1-201ENST00000490847 418 ntBASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 IGBP1P4-201ENST00000503202 879 ntBASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 AP000662.1-201ENST00000530952 487 ntBASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 CBX3P5-201ENST00000552017 521 ntBASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 AL355836.1-201ENST00000555951 870 ntBASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 HMGB1P33-201ENST00000563485 527 ntBASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 AL078623.1-201ENST00000602702 907 ntBASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 MIR6745-201ENST00000612694 127 ntBASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 MIR6761-201ENST00000617899 72 ntBASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 AC120349.2-201ENST00000625002 298 ntBASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 AC117409.1-201ENST00000470499 1310 ntBASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.51□□□□□ -1.21
CUEDC1Q9NWM3 MAPK10-281ENST00000641170 3070 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms