Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AC015983.1-201ENST00000441577 373 ntBASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 AC097463.1-201ENST00000447288 481 ntBASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 AC004129.2-201ENST00000457229 287 ntBASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 AC019084.1-201ENST00000457337 432 ntBASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 AC069304.1-201ENST00000491593 704 ntBASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 AL049874.2-201ENST00000492636 288 ntBASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 AL117692.1-201ENST00000494283 713 ntBASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 ENPP7P11-201ENST00000505915 627 ntBASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 AC105384.2-201ENST00000508433 640 ntBASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 AC009879.1-201ENST00000520029 839 ntBASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 AP003396.4-201ENST00000527574 265 ntBASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 AC084121.1-201ENST00000533882 835 ntBASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 AL359091.2-201ENST00000609303 556 ntBASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 AC004801.6-201ENST00000616571 978 ntBASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 AC073592.6-201ENST00000624271 415 ntBASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 MAPK10-338ENST00000641647 3362 ntBASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 HSPD1P7-201ENST00000447985 1686 ntBASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 AL022322.2-201ENST00000624072 20397 ntBASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 AC011755.1-201ENST00000623763 2049 ntBASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 AL929601.4-201ENST00000613011 1341 ntBASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 AC119674.1-202ENST00000641333 1860 ntBASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 RNA5SP110-201ENST00000362638 115 ntBASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 AL121878.1-201ENST00000418638 859 ntBASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 RN7SL649P-201ENST00000496974 275 ntBASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 AC111000.5-201ENST00000506559 1178 ntBASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 HSD3BP3-201ENST00000514706 994 ntBASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 AC106730.2-201ENST00000566641 540 ntBASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 AC010547.7-201ENST00000570323 333 ntBASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 AC016252.1-201ENST00000609721 474 ntBASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 MIR7109-201ENST00000613748 65 ntBASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 AC073488.3-201ENST00000631611 778 ntBASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 AC104623.2-202ENST00000623477 4002 ntBASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCNB1IP1Q9NPC3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCNB1IP1Q9NPC3 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CCNB1IP1Q9NPC3 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms