Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 OR4D12P-201ENST00000509361 911 ntBASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 MRPS5P3-201ENST00000515577 166 ntBASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 AC138517.1-201ENST00000515724 568 ntBASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 HMGN2P47-201ENST00000559378 272 ntBASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 MIR4509-3-201ENST00000578671 94 ntBASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 MIR3157-201ENST00000578688 85 ntBASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 AP000919.1-202ENST00000581139 1264 ntBASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 MIR4509-2-201ENST00000583920 94 ntBASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 AC063977.7-201ENST00000594454 337 ntBASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 OR7A19P-201ENST00000608051 733 ntBASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 MIR4509-1-201ENST00000618224 94 ntBASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 AC005899.6-201ENST00000620729 297 ntBASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 AC089999.3-201ENST00000622440 577 ntBASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 AL122023.1-201ENST00000622847 530 ntBASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM54Q9BYV2 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 AC005725.1-201ENST00000577346 2607 ntBASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 AL034417.1-201ENST00000399343 800 ntBASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 AL133260.1-201ENST00000405720 405 ntBASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 RN7SKP151-201ENST00000410230 316 ntBASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 SNORA79B-201ENST00000410557 148 ntBASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 RN7SKP121-201ENST00000410842 305 ntBASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 UBE2V1P9-201ENST00000414760 368 ntBASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 TCEA1P2-201ENST00000420496 906 ntBASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 RPL7AP14-201ENST00000424041 802 ntBASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 AC112492.2-201ENST00000432774 1030 ntBASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 AC064862.5-201ENST00000440618 334 ntBASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 SNRPFP2-201ENST00000440710 251 ntBASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 AL645936.1-201ENST00000441979 518 ntBASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 CXCR2P1-202ENST00000443392 1074 ntBASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 AC069277.2-201ENST00000454211 432 ntBASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 RAB28P2-201ENST00000454299 641 ntBASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 RPL12P24-201ENST00000474907 486 ntBASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 SUMO2P5-201ENST00000506790 245 ntBASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 AC118942.1-201ENST00000529674 1035 ntBASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 MIR744-201ENST00000578242 98 ntBASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 BNIP3P38-201ENST00000601117 544 ntBASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 AL583832.1-201ENST00000603227 784 ntBASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 AC112220.2-201ENST00000605513 533 ntBASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 AL109659.3-201ENST00000624985 950 ntBASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 DDX18P6-201ENST00000450119 1997 ntBASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms