Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 AC073333.2-201ENST00000603589 769 ntBASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 AC092681.3-201ENST00000609463 678 ntBASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 AL356608.1-201ENST00000610034 820 ntBASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC28BQ9BUN5 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 AL133260.1-201ENST00000405720 405 ntBASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 NIFKP3-201ENST00000417799 865 ntBASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 MYB-206ENST00000420123 1051 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 RPL7AP51-201ENST00000422016 760 ntBASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 GAPDHP48-201ENST00000436626 961 ntBASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 AC092601.1-201ENST00000444526 383 ntBASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 TAAR4P-201ENST00000454843 1039 ntBASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 RNA5SP103-201ENST00000459503 118 ntBASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 SUMO2P4-201ENST00000504193 276 ntBASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 AC096996.1-201ENST00000563813 325 ntBASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 AP005119.1-201ENST00000580956 292 ntBASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 RN7SL657P-201ENST00000582431 293 ntBASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 AC068768.2-201ENST00000602352 343 ntBASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 AP001962.1-201ENST00000624114 559 ntBASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC28BQ9BUN5 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 AC000374.1-201ENST00000434698 1745 ntBASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 AL353796.1-201ENST00000561542 3241 ntBASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 AL096711.1-201ENST00000404780 554 ntBASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 COX5BP7-201ENST00000414780 274 ntBASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 RIMKLBP2-201ENST00000424737 654 ntBASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 AC092865.3-201ENST00000425390 1026 ntBASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 AC099782.1-201ENST00000425889 474 ntBASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 AC122714.1-201ENST00000502510 459 ntBASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 AC021193.1-201ENST00000511607 420 ntBASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms