Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 NPM1P19-201ENST00000450070 712 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 MTCO3P16-201ENST00000454456 754 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 MTND2P28-201ENST00000457540 1044 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 SNORD11.1-201ENST00000459482 85 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 BET1P1-201ENST00000482276 359 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 RPL34P33-201ENST00000486062 334 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 MORF4L2P1-201ENST00000503761 858 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 KCTD9P4-201ENST00000526766 1166 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 RPA2P3-201ENST00000533268 770 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 AC074029.2-201ENST00000551045 634 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 AL121579.2-201ENST00000555466 590 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 MTND3P13-201ENST00000574391 343 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 OOSP1P2-201ENST00000579644 351 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 AC091193.1-201ENST00000604640 448 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 AL683813.2-201ENST00000605245 502 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 AC092681.3-201ENST00000609463 678 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 AC009318.3-201ENST00000616916 503 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 TMEM161BP1-201ENST00000457388 1457 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 AC095050.2-201ENST00000510748 1458 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 AL391261.1-201ENST00000555712 1479 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 AL078595.2-201ENST00000605309 1780 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 AL451142.1-201ENST00000375867 775 ntBASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 RPS7P8-201ENST00000418311 581 ntBASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 AC092570.3-201ENST00000420113 693 ntBASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 TCEA1P2-201ENST00000420496 906 ntBASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 AL512637.2-201ENST00000431287 1256 ntBASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 TRBV26OR9-2-201ENST00000432077 293 ntBASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 PSMD10P2-201ENST00000432890 672 ntBASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 AL035246.1-201ENST00000433554 1255 ntBASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 MTCYBP39-201ENST00000437562 491 ntBASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 AC117394.1-201ENST00000477323 567 ntBASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 PFN1P8-201ENST00000497012 543 ntBASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 AC104997.1-201ENST00000519761 717 ntBASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 AP001858.2-201ENST00000536213 601 ntBASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 LYZ-203ENST00000549690 669 ntTSL 2 BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 AC092332.1-201ENST00000563684 829 ntBASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 AC106730.2-201ENST00000566641 540 ntBASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.51□□□□□ -1.37
CDK5RAP1Q96SZ6 AL353778.1-201ENST00000603149 408 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms