Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RPS7P6-201ENST00000485777 579 ntBASIC9.03□□□□□ -0.96
IFT140Q96RY7 BTF3P13-201ENST00000513224 490 ntBASIC9.03□□□□□ -0.96
IFT140Q96RY7 IGKV1-32-201ENST00000519290 311 ntBASIC9.03□□□□□ -0.96
IFT140Q96RY7 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
IFT140Q96RY7 AC006115.2-201ENST00000596823 202 ntBASIC9.03□□□□□ -0.96
IFT140Q96RY7 AC020765.1-201ENST00000604296 328 ntBASIC9.03□□□□□ -0.96
IFT140Q96RY7 AC091193.1-201ENST00000604640 448 ntBASIC9.03□□□□□ -0.96
IFT140Q96RY7 AC009597.2-201ENST00000604659 592 ntBASIC9.03□□□□□ -0.96
IFT140Q96RY7 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
IFT140Q96RY7 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
IFT140Q96RY7 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
IFT140Q96RY7 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
IFT140Q96RY7 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
IFT140Q96RY7 CDY5P-201ENST00000411487 1580 ntBASIC9.03□□□□□ -0.96
IFT140Q96RY7 CDY9P-201ENST00000451397 1580 ntBASIC9.03□□□□□ -0.96
IFT140Q96RY7 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
IFT140Q96RY7 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
IFT140Q96RY7 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
IFT140Q96RY7 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
IFT140Q96RY7 GJA6P-201ENST00000415117 1042 ntBASIC9.02□□□□□ -0.96
IFT140Q96RY7 AC007064.3-201ENST00000422608 359 ntBASIC9.02□□□□□ -0.96
IFT140Q96RY7 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC9.02□□□□□ -0.96
IFT140Q96RY7 NANOGP9-201ENST00000439890 892 ntBASIC9.02□□□□□ -0.96
IFT140Q96RY7 RN7SL817P-201ENST00000480777 288 ntBASIC9.02□□□□□ -0.96
IFT140Q96RY7 GTF2F2P1-201ENST00000511083 675 ntBASIC9.02□□□□□ -0.96
IFT140Q96RY7 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC9.02□□□□□ -0.96
IFT140Q96RY7 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC9.02□□□□□ -0.96
IFT140Q96RY7 AC008147.3-201ENST00000548666 354 ntBASIC9.02□□□□□ -0.96
IFT140Q96RY7 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC9.02□□□□□ -0.96
IFT140Q96RY7 AL163952.1-202ENST00000569625 600 ntBASIC9.02□□□□□ -0.96
IFT140Q96RY7 TEX41-238ENST00000604253 709 ntTSL 5 BASIC9.02□□□□□ -0.96
IFT140Q96RY7 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
IFT140Q96RY7 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC9.02□□□□□ -0.96
IFT140Q96RY7 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
IFT140Q96RY7 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC9.02□□□□□ -0.97
IFT140Q96RY7 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
IFT140Q96RY7 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
IFT140Q96RY7 AC008124.1-201ENST00000609803 9730 ntBASIC9.02□□□□□ -0.97
IFT140Q96RY7 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
IFT140Q96RY7 SDAD1P1-202ENST00000524156 2051 ntBASIC9.02□□□□□ -0.97
IFT140Q96RY7 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
IFT140Q96RY7 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
IFT140Q96RY7 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
IFT140Q96RY7 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
IFT140Q96RY7 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC9.02□□□□□ -0.97
IFT140Q96RY7 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC9.02□□□□□ -0.97
IFT140Q96RY7 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC9.02□□□□□ -0.97
IFT140Q96RY7 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
IFT140Q96RY7 NUDT19P3-201ENST00000404698 555 ntBASIC9.02□□□□□ -0.97
IFT140Q96RY7 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC9.02□□□□□ -0.97
IFT140Q96RY7 RPL23AP72-201ENST00000492447 435 ntBASIC9.02□□□□□ -0.97
IFT140Q96RY7 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC9.02□□□□□ -0.97
IFT140Q96RY7 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
IFT140Q96RY7 DHFRP1-201ENST00000579682 559 ntBASIC9.02□□□□□ -0.97
IFT140Q96RY7 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
IFT140Q96RY7 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
IFT140Q96RY7 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
IFT140Q96RY7 NXF4-202ENST00000416098 1465 ntBASIC9.01□□□□□ -0.97
IFT140Q96RY7 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC9.01□□□□□ -0.97
IFT140Q96RY7 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC9.01□□□□□ -0.97
IFT140Q96RY7 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
IFT140Q96RY7 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC9.01□□□□□ -0.97
IFT140Q96RY7 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
IFT140Q96RY7 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
IFT140Q96RY7 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
IFT140Q96RY7 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
IFT140Q96RY7 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
IFT140Q96RY7 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC9.01□□□□□ -0.97
IFT140Q96RY7 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
IFT140Q96RY7 SNORD8-201ENST00000363915 110 ntBASIC9.01□□□□□ -0.97
IFT140Q96RY7 RNU2-50P-201ENST00000410494 143 ntBASIC9.01□□□□□ -0.97
IFT140Q96RY7 CHEK2P3-201ENST00000416118 248 ntBASIC9.01□□□□□ -0.97
IFT140Q96RY7 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC9.01□□□□□ -0.97
IFT140Q96RY7 RPL12P17-201ENST00000432393 498 ntBASIC9.01□□□□□ -0.97
IFT140Q96RY7 RPL36AP15-201ENST00000444514 266 ntBASIC9.01□□□□□ -0.97
IFT140Q96RY7 HCG14-201ENST00000444986 413 ntTSL 2 BASIC9.01□□□□□ -0.97
IFT140Q96RY7 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
IFT140Q96RY7 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC9.01□□□□□ -0.97
IFT140Q96RY7 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC9.01□□□□□ -0.97
IFT140Q96RY7 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC9.01□□□□□ -0.97
IFT140Q96RY7 IGKV2D-10-201ENST00000520194 281 ntBASIC9.01□□□□□ -0.97
IFT140Q96RY7 YWHABP2-201ENST00000540201 713 ntBASIC9.01□□□□□ -0.97
IFT140Q96RY7 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC9.01□□□□□ -0.97
IFT140Q96RY7 MIR4284-201ENST00000578924 81 ntBASIC9.01□□□□□ -0.97
IFT140Q96RY7 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
IFT140Q96RY7 MAPK10-304ENST00000641341 3984 ntBASIC9.01□□□□□ -0.97
IFT140Q96RY7 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
IFT140Q96RY7 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC9□□□□□ -0.97
IFT140Q96RY7 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
IFT140Q96RY7 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
IFT140Q96RY7 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
IFT140Q96RY7 DOCK11P1-201ENST00000553480 5932 ntBASIC9□□□□□ -0.97
IFT140Q96RY7 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
IFT140Q96RY7 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC9□□□□□ -0.97
IFT140Q96RY7 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
IFT140Q96RY7 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
IFT140Q96RY7 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC9□□□□□ -0.97
IFT140Q96RY7 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
IFT140Q96RY7 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC9□□□□□ -0.97
IFT140Q96RY7 TMA16P2-201ENST00000413187 601 ntBASIC9□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms