Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC020656.2-201ENST00000613291 5309 ntBASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 RLIMP2-201ENST00000427891 1563 ntBASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 RNU1-150P-201ENST00000362491 162 ntBASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 RNA5SP453-201ENST00000362503 119 ntBASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 RNU6-386P-201ENST00000362650 107 ntBASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 RNA5SP500-201ENST00000364486 119 ntBASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 AC009506.2-201ENST00000420635 840 ntBASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 HMGB3P10-201ENST00000434734 572 ntBASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 NDUFS5P5-201ENST00000437256 321 ntBASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 C1DP3-201ENST00000455013 423 ntBASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 RPS7P6-201ENST00000485777 579 ntBASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 AC097486.1-201ENST00000515331 210 ntBASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 AC139365.2-201ENST00000517972 253 ntBASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 EIF1AXP2-201ENST00000555940 413 ntBASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 COX6CP7-201ENST00000597056 208 ntBASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 AC074140.1-201ENST00000621617 208 ntBASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 AC005618.4-201ENST00000625053 554 ntBASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.65□□□□□ -1.5
PDLIM5Q96HC4 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.65□□□□□ -1.51
PDLIM5Q96HC4 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.65□□□□□ -1.51
PDLIM5Q96HC4 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.65□□□□□ -1.51
PDLIM5Q96HC4 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
PDLIM5Q96HC4 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.65□□□□□ -1.51
PDLIM5Q96HC4 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.65□□□□□ -1.51
PDLIM5Q96HC4 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PDLIM5Q96HC4 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
PDLIM5Q96HC4 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 AC109446.4-201ENST00000623235 2755 ntBASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 AC004076.2-201ENST00000620532 3323 ntBASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 RNA5SP477-201ENST00000362639 119 ntBASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 RN7SKP186-201ENST00000365371 303 ntBASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 NIFKP3-201ENST00000417799 865 ntBASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 OR10T1P-201ENST00000424327 947 ntBASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 BX276092.6-201ENST00000430476 250 ntBASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 AC069154.1-201ENST00000432914 542 ntBASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 RPS23P9-201ENST00000448848 438 ntBASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 BX276092.8-201ENST00000455722 250 ntBASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 AC093166.4-201ENST00000457867 318 ntBASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 RPS23P2-201ENST00000463671 415 ntBASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 AC107015.1-201ENST00000466902 747 ntBASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 AC022336.1-201ENST00000475510 337 ntBASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 AC073610.1-201ENST00000489971 396 ntBASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 AC025458.1-201ENST00000506046 166 ntBASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 OR8Q1P-201ENST00000526467 655 ntBASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 AC027369.2-201ENST00000528030 440 ntBASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 AC137627.1-201ENST00000545761 289 ntBASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms