Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 PWAR1-201ENST00000624188 2414 ntBASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 OR6E1P-201ENST00000414424 923 ntBASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 AL133173.1-201ENST00000423458 397 ntBASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 DNAJC19P5-201ENST00000443295 316 ntBASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 AL596266.1-201ENST00000448132 400 ntBASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 RPSAP39-201ENST00000467439 883 ntBASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 RN7SL466P-201ENST00000497546 295 ntBASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 AC137627.1-201ENST00000545761 289 ntBASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 SNORD95-201ENST00000579879 68 ntBASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 MIR6862-1-201ENST00000613016 70 ntBASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 MIR6862-2-201ENST00000614755 70 ntBASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 AL691477.1-201ENST00000624398 162 ntBASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 AP001153.1-201ENST00000641024 338 ntBASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 AC027279.4-201ENST00000624371 2072 ntBASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ECHDC3Q96DC8 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 AL592429.1-201ENST00000403909 1473 ntBASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 MIR143-201ENST00000385300 106 ntBASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 AC092642.1-201ENST00000392417 425 ntBASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 METTL15P3-201ENST00000415522 1221 ntBASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 TNPO1P1-201ENST00000423641 1138 ntBASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 VDAC2P4-201ENST00000452925 711 ntBASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 AP000547.1-201ENST00000454360 617 ntBASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 AC106872.4-201ENST00000510050 523 ntBASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 AC009962.1-201ENST00000567327 3813 ntBASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 AC025574.2-201ENST00000615621 514 ntBASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
ECHDC3Q96DC8 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
ECHDC3Q96DC8 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ECHDC3Q96DC8 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ECHDC3Q96DC8 KYNUP3-201ENST00000574386 1341 ntBASIC5.65□□□□□ -1.51
ECHDC3Q96DC8 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
ECHDC3Q96DC8 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
ECHDC3Q96DC8 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
ECHDC3Q96DC8 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
ECHDC3Q96DC8 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ECHDC3Q96DC8 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.51
ECHDC3Q96DC8 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ECHDC3Q96DC8 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ECHDC3Q96DC8 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
ECHDC3Q96DC8 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ECHDC3Q96DC8 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.64□□□□□ -1.51
ECHDC3Q96DC8 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ECHDC3Q96DC8 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
ECHDC3Q96DC8 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.64□□□□□ -1.51
ECHDC3Q96DC8 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
ECHDC3Q96DC8 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
ECHDC3Q96DC8 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ECHDC3Q96DC8 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ECHDC3Q96DC8 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ECHDC3Q96DC8 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms