Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 PARP4P2-201ENST00000446672 3326 ntBASIC5.63□□□□□ -1.51
VPS33AQ96AX1 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 SNORA21-201ENST00000362423 132 ntBASIC5.63□□□□□ -1.51
VPS33AQ96AX1 RNU4-7P-201ENST00000364758 141 ntBASIC5.63□□□□□ -1.51
VPS33AQ96AX1 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 SNRPEP6-201ENST00000407465 277 ntBASIC5.63□□□□□ -1.51
VPS33AQ96AX1 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 RN7SKP108-201ENST00000411367 328 ntBASIC5.63□□□□□ -1.51
VPS33AQ96AX1 MTCYBP7-201ENST00000419540 1134 ntBASIC5.63□□□□□ -1.51
VPS33AQ96AX1 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 SEPT14P12-201ENST00000442280 560 ntBASIC5.63□□□□□ -1.51
VPS33AQ96AX1 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 AC097359.1-201ENST00000447946 463 ntBASIC5.63□□□□□ -1.51
VPS33AQ96AX1 AC093166.3-201ENST00000448785 303 ntBASIC5.63□□□□□ -1.51
VPS33AQ96AX1 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 RN7SL393P-201ENST00000463588 296 ntBASIC5.63□□□□□ -1.51
VPS33AQ96AX1 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 RPL12P30-201ENST00000488389 499 ntBASIC5.63□□□□□ -1.51
VPS33AQ96AX1 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 SNX18P25-201ENST00000510539 758 ntBASIC5.63□□□□□ -1.51
VPS33AQ96AX1 ZNF519P4-201ENST00000514008 125 ntBASIC5.63□□□□□ -1.51
VPS33AQ96AX1 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 AC027026.1-201ENST00000532323 742 ntBASIC5.63□□□□□ -1.51
VPS33AQ96AX1 AC084824.2-201ENST00000548906 345 ntBASIC5.63□□□□□ -1.51
VPS33AQ96AX1 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 SNX6P1-201ENST00000601728 1224 ntBASIC5.63□□□□□ -1.51
VPS33AQ96AX1 BMS1P7-201ENST00000602440 1052 ntBASIC5.63□□□□□ -1.51
VPS33AQ96AX1 AC073111.2-201ENST00000605657 1075 ntBASIC5.63□□□□□ -1.51
VPS33AQ96AX1 AC012467.1-201ENST00000607740 256 ntBASIC5.63□□□□□ -1.51
VPS33AQ96AX1 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 AC096708.4-201ENST00000620563 552 ntBASIC5.63□□□□□ -1.51
VPS33AQ96AX1 AC005618.4-201ENST00000625053 554 ntBASIC5.63□□□□□ -1.51
VPS33AQ96AX1 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 RBMY1HP-201ENST00000382759 1389 ntBASIC5.63□□□□□ -1.51
VPS33AQ96AX1 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.63□□□□□ -1.51
VPS33AQ96AX1 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS33AQ96AX1 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 SPATA2P1-201ENST00000431223 2055 ntBASIC5.62□□□□□ -1.51
VPS33AQ96AX1 GVINP1-202ENST00000531871 7271 ntBASIC5.62□□□□□ -1.51
VPS33AQ96AX1 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 AC087752.1-201ENST00000391360 558 ntBASIC5.62□□□□□ -1.51
VPS33AQ96AX1 AL034403.1-201ENST00000399414 885 ntBASIC5.62□□□□□ -1.51
VPS33AQ96AX1 EEF1B2P8-201ENST00000414101 671 ntBASIC5.62□□□□□ -1.51
VPS33AQ96AX1 RNF19BPX-201ENST00000426224 625 ntBASIC5.62□□□□□ -1.51
VPS33AQ96AX1 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 RPEP4-201ENST00000437636 602 ntBASIC5.62□□□□□ -1.51
VPS33AQ96AX1 Z99127.2-201ENST00000441426 334 ntBASIC5.62□□□□□ -1.51
VPS33AQ96AX1 RPS7P3-201ENST00000443360 580 ntBASIC5.62□□□□□ -1.51
VPS33AQ96AX1 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 AC069277.2-201ENST00000454211 432 ntBASIC5.62□□□□□ -1.51
VPS33AQ96AX1 HSPE1P22-201ENST00000456856 327 ntBASIC5.62□□□□□ -1.51
VPS33AQ96AX1 H3F3AP5-201ENST00000475267 429 ntBASIC5.62□□□□□ -1.51
VPS33AQ96AX1 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 HMGN1P16-201ENST00000508308 283 ntBASIC5.62□□□□□ -1.51
VPS33AQ96AX1 CR383658.1-201ENST00000514609 734 ntBASIC5.62□□□□□ -1.51
VPS33AQ96AX1 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 HMGN1P26-201ENST00000558737 303 ntBASIC5.62□□□□□ -1.51
VPS33AQ96AX1 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 AC122134.1-201ENST00000565664 1104 ntBASIC5.62□□□□□ -1.51
VPS33AQ96AX1 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 AC099654.6-201ENST00000636487 512 ntBASIC5.62□□□□□ -1.51
VPS33AQ96AX1 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 OR9K1P-202ENST00000641111 3217 ntBASIC5.62□□□□□ -1.51
VPS33AQ96AX1 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VPS33AQ96AX1 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms