Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC022916.3-201ENST00000592961 742 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC8.05□□□□□ -1.12
HLA-CQ95604 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC8.05□□□□□ -1.12
HLA-CQ95604 MIR6885-201ENST00000612241 66 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
HLA-CQ95604 AC243756.2-201ENST00000618406 463 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-CQ95604 UTP23-201ENST00000309822 3699 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-CQ95604 LINC00607-205ENST00000445174 3690 ntTSL 2 BASIC8.05□□□□□ -1.12
HLA-CQ95604 AL357556.1-201ENST00000421884 1388 ntBASIC8.05□□□□□ -1.12
HLA-CQ95604 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC8.05□□□□□ -1.12
HLA-CQ95604 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
HLA-CQ95604 ZNF185-212ENST00000539731 4334 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
HLA-CQ95604 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-CQ95604 TDG-202ENST00000392872 3251 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-CQ95604 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-CQ95604 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC8.05□□□□□ -1.12
HLA-CQ95604 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-CQ95604 ACSBG2-206ENST00000588485 2478 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-CQ95604 CCDC15-203ENST00000529051 3924 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
HLA-CQ95604 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-CQ95604 CHODL-206ENST00000400135 2136 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-CQ95604 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-CQ95604 MELK-207ENST00000536860 2342 ntTSL 2 BASIC8.04□□□□□ -1.12
HLA-CQ95604 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
HLA-CQ95604 LINC02128-205ENST00000641755 1334 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC8.04□□□□□ -1.12
HLA-CQ95604 SP140L-201ENST00000243810 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
HLA-CQ95604 GTF2H2B-203ENST00000508065 1432 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 XIRP2-206ENST00000409728 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
HLA-CQ95604 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC8.04□□□□□ -1.12
HLA-CQ95604 CTNNA2-203ENST00000402739 3684 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
HLA-CQ95604 FAM13C-214ENST00000611933 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
HLA-CQ95604 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC8.04□□□□□ -1.12
HLA-CQ95604 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC8.04□□□□□ -1.12
HLA-CQ95604 PIGN-251ENST00000640876 6045 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
HLA-CQ95604 C2orf42-201ENST00000264434 2581 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
HLA-CQ95604 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC8.04□□□□□ -1.12
HLA-CQ95604 CECR2-206ENST00000612582 9645 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
HLA-CQ95604 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
HLA-CQ95604 Y_RNA.58-201ENST00000362807 102 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 Y_RNA.154-201ENST00000363624 102 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 RNU6-1322P-201ENST00000364309 107 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 SNORA63C-201ENST00000364578 129 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 RNY3P1-201ENST00000365085 102 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 RNY3-201ENST00000365484 102 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
HLA-CQ95604 AL139327.1-201ENST00000382988 348 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 Y_RNA.490-201ENST00000384413 102 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC8.04□□□□□ -1.12
HLA-CQ95604 RN7SKP140-201ENST00000411196 284 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 JKAMPP1-201ENST00000413804 919 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 AL953862.1-201ENST00000423016 168 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 NANOGP6-201ENST00000429190 847 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 AC109583.1-201ENST00000432156 268 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 AC108059.2-201ENST00000434626 151 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 AL136454.1-201ENST00000443181 466 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 AC079448.1-201ENST00000449377 373 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 AC104306.1-201ENST00000449702 371 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 AL590365.1-201ENST00000450788 243 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 AC016724.1-201ENST00000453215 421 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 AL121877.1-201ENST00000453704 622 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 RPL31P11-202ENST00000454082 372 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 C1DP4-201ENST00000455429 424 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC8.04□□□□□ -1.12
HLA-CQ95604 RPS15AP36-201ENST00000492022 382 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC8.04□□□□□ -1.12
HLA-CQ95604 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC8.04□□□□□ -1.12
HLA-CQ95604 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC8.04□□□□□ -1.12
HLA-CQ95604 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
HLA-CQ95604 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
HLA-CQ95604 LINC02121-201ENST00000507950 432 ntTSL 2 BASIC8.04□□□□□ -1.12
HLA-CQ95604 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC8.04□□□□□ -1.12
HLA-CQ95604 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC8.04□□□□□ -1.12
HLA-CQ95604 AC113352.1-201ENST00000513196 666 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 AC107220.1-201ENST00000514347 1037 ntTSL 3 BASIC8.04□□□□□ -1.12
HLA-CQ95604 MTND5P4-201ENST00000514978 288 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC8.04□□□□□ -1.12
HLA-CQ95604 AP003467.2-201ENST00000520175 319 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC8.04□□□□□ -1.12
HLA-CQ95604 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC8.04□□□□□ -1.12
HLA-CQ95604 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC8.04□□□□□ -1.12
HLA-CQ95604 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC8.04□□□□□ -1.12
HLA-CQ95604 GNG2-215ENST00000557376 573 ntTSL 4 BASIC8.04□□□□□ -1.12
HLA-CQ95604 AC020661.2-201ENST00000560114 134 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 AL845331.3-202ENST00000562856 261 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC8.04□□□□□ -1.12
HLA-CQ95604 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC8.04□□□□□ -1.12
HLA-CQ95604 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC8.04□□□□□ -1.12
HLA-CQ95604 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC8.04□□□□□ -1.12
HLA-CQ95604 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC8.04□□□□□ -1.12
HLA-CQ95604 ANKRD20A19P-203ENST00000602724 295 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 AC104010.1-201ENST00000616889 150 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
HLA-CQ95604 AC005609.2-201ENST00000623320 592 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 AC129778.1-202ENST00000623812 261 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 AL591379.1-207ENST00000635982 261 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 AMYH02020865.1-205ENST00000636189 261 ntBASIC8.04□□□□□ -1.12
HLA-CQ95604 BTK-202ENST00000372880 2248 ntTSL 2 BASIC8.04□□□□□ -1.12
HLA-CQ95604 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms