Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USP41Q3LFD5 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USP41Q3LFD5 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USP41Q3LFD5 AC123769.1-201ENST00000530992 3192 ntBASIC6.2□□□□□ -1.42
USP41Q3LFD5 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
USP41Q3LFD5 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.2□□□□□ -1.42
USP41Q3LFD5 RN7SKP124-201ENST00000364730 341 ntBASIC6.2□□□□□ -1.42
USP41Q3LFD5 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.2□□□□□ -1.42
USP41Q3LFD5 RNU6-891P-201ENST00000384280 111 ntBASIC6.2□□□□□ -1.42
USP41Q3LFD5 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
USP41Q3LFD5 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
USP41Q3LFD5 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.2□□□□□ -1.42
USP41Q3LFD5 BMS1P13-201ENST00000417301 885 ntBASIC6.2□□□□□ -1.42
USP41Q3LFD5 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USP41Q3LFD5 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.2□□□□□ -1.42
USP41Q3LFD5 AC019205.1-201ENST00000421830 730 ntBASIC6.2□□□□□ -1.42
USP41Q3LFD5 BTBD7P2-201ENST00000441962 620 ntBASIC6.2□□□□□ -1.42
USP41Q3LFD5 MYO5BP2-201ENST00000449815 1277 ntBASIC6.2□□□□□ -1.42
USP41Q3LFD5 AL603882.1-201ENST00000463059 681 ntBASIC6.2□□□□□ -1.42
USP41Q3LFD5 SNRPCP3-201ENST00000474888 476 ntBASIC6.2□□□□□ -1.42
USP41Q3LFD5 OR52A4P-202ENST00000481634 799 ntBASIC6.2□□□□□ -1.42
USP41Q3LFD5 AC090058.1-201ENST00000498788 435 ntBASIC6.2□□□□□ -1.42
USP41Q3LFD5 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
USP41Q3LFD5 AC008638.1-201ENST00000506035 866 ntBASIC6.2□□□□□ -1.42
USP41Q3LFD5 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.2□□□□□ -1.42
USP41Q3LFD5 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.2□□□□□ -1.42
USP41Q3LFD5 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.2□□□□□ -1.42
USP41Q3LFD5 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.2□□□□□ -1.42
USP41Q3LFD5 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC6.2□□□□□ -1.42
USP41Q3LFD5 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USP41Q3LFD5 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.2□□□□□ -1.42
USP41Q3LFD5 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USP41Q3LFD5 AC090651.1-201ENST00000567865 634 ntBASIC6.2□□□□□ -1.42
USP41Q3LFD5 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.2□□□□□ -1.42
USP41Q3LFD5 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.2□□□□□ -1.42
USP41Q3LFD5 BX322635.1-201ENST00000605804 496 ntBASIC6.2□□□□□ -1.42
USP41Q3LFD5 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC6.2□□□□□ -1.42
USP41Q3LFD5 AC079395.2-201ENST00000610982 737 ntBASIC6.2□□□□□ -1.42
USP41Q3LFD5 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.2□□□□□ -1.42
USP41Q3LFD5 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
USP41Q3LFD5 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.2□□□□□ -1.42
USP41Q3LFD5 AL137058.3-201ENST00000624531 3099 ntBASIC6.2□□□□□ -1.42
USP41Q3LFD5 Z83820.1-201ENST00000456978 1499 ntBASIC6.2□□□□□ -1.42
USP41Q3LFD5 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USP41Q3LFD5 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
USP41Q3LFD5 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USP41Q3LFD5 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.19□□□□□ -1.42
USP41Q3LFD5 AC087516.1-201ENST00000561236 2428 ntBASIC6.19□□□□□ -1.42
USP41Q3LFD5 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
USP41Q3LFD5 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
USP41Q3LFD5 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
USP41Q3LFD5 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
USP41Q3LFD5 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
USP41Q3LFD5 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
USP41Q3LFD5 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
USP41Q3LFD5 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
USP41Q3LFD5 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
USP41Q3LFD5 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.19□□□□□ -1.42
USP41Q3LFD5 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
USP41Q3LFD5 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
USP41Q3LFD5 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
USP41Q3LFD5 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
USP41Q3LFD5 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
USP41Q3LFD5 RN7SKP162-201ENST00000363605 345 ntBASIC6.19□□□□□ -1.42
USP41Q3LFD5 AL050305.1-201ENST00000399993 1230 ntBASIC6.19□□□□□ -1.42
USP41Q3LFD5 MIR1178-201ENST00000408396 91 ntBASIC6.19□□□□□ -1.42
USP41Q3LFD5 OR6E1P-201ENST00000414424 923 ntBASIC6.19□□□□□ -1.42
USP41Q3LFD5 AC016769.2-201ENST00000414815 475 ntBASIC6.19□□□□□ -1.42
USP41Q3LFD5 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.19□□□□□ -1.42
USP41Q3LFD5 AC016027.5-201ENST00000427227 210 ntBASIC6.19□□□□□ -1.42
USP41Q3LFD5 BRWD1P3-201ENST00000428816 390 ntBASIC6.19□□□□□ -1.42
USP41Q3LFD5 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
USP41Q3LFD5 AL731534.1-201ENST00000434711 269 ntBASIC6.19□□□□□ -1.42
USP41Q3LFD5 RN7SL72P-201ENST00000460697 269 ntBASIC6.19□□□□□ -1.42
USP41Q3LFD5 SIAH1P1-201ENST00000479411 923 ntBASIC6.19□□□□□ -1.42
USP41Q3LFD5 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.19□□□□□ -1.42
USP41Q3LFD5 AC009120.1-201ENST00000493458 473 ntBASIC6.19□□□□□ -1.42
USP41Q3LFD5 AC108693.1-201ENST00000496068 432 ntBASIC6.19□□□□□ -1.42
USP41Q3LFD5 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.19□□□□□ -1.42
USP41Q3LFD5 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.19□□□□□ -1.42
USP41Q3LFD5 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.19□□□□□ -1.42
USP41Q3LFD5 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.19□□□□□ -1.42
USP41Q3LFD5 MTND2P31-201ENST00000512602 616 ntBASIC6.19□□□□□ -1.42
USP41Q3LFD5 RN7SKP5-201ENST00000517045 272 ntBASIC6.19□□□□□ -1.42
USP41Q3LFD5 AC021678.3-201ENST00000517893 476 ntBASIC6.19□□□□□ -1.42
USP41Q3LFD5 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.19□□□□□ -1.42
USP41Q3LFD5 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.19□□□□□ -1.42
USP41Q3LFD5 MIR1273E-201ENST00000581165 102 ntBASIC6.19□□□□□ -1.42
USP41Q3LFD5 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.19□□□□□ -1.42
USP41Q3LFD5 MIR132-201ENST00000591554 101 ntBASIC6.19□□□□□ -1.42
USP41Q3LFD5 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.19□□□□□ -1.42
USP41Q3LFD5 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.19□□□□□ -1.42
USP41Q3LFD5 AL390318.1-201ENST00000624564 687 ntBASIC6.19□□□□□ -1.42
USP41Q3LFD5 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
USP41Q3LFD5 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
USP41Q3LFD5 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.19□□□□□ -1.42
USP41Q3LFD5 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
USP41Q3LFD5 AC005725.1-201ENST00000577346 2607 ntBASIC6.19□□□□□ -1.42
USP41Q3LFD5 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.19□□□□□ -1.42
USP41Q3LFD5 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms