Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MIR744-201ENST00000578242 98 ntBASIC5.71□□□□□ -1.5
RAE1P78406 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RAE1P78406 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.71□□□□□ -1.5
RAE1P78406 AC079880.2-201ENST00000603790 1213 ntBASIC5.71□□□□□ -1.5
RAE1P78406 AC005021.1-201ENST00000608730 355 ntBASIC5.71□□□□□ -1.5
RAE1P78406 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.71□□□□□ -1.5
RAE1P78406 DUXAP10-204ENST00000612052 616 ntBASIC5.71□□□□□ -1.5
RAE1P78406 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.71□□□□□ -1.5
RAE1P78406 AC007159.1-201ENST00000566529 4706 ntBASIC5.71□□□□□ -1.5
RAE1P78406 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
RAE1P78406 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RAE1P78406 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RAE1P78406 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RAE1P78406 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RAE1P78406 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.71□□□□□ -1.5
RAE1P78406 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.71□□□□□ -1.5
RAE1P78406 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RAE1P78406 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RAE1P78406 HSPD1P14-201ENST00000432666 1618 ntBASIC5.7□□□□□ -1.5
RAE1P78406 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RAE1P78406 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RAE1P78406 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
RAE1P78406 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
RAE1P78406 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RAE1P78406 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.7□□□□□ -1.5
RAE1P78406 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RAE1P78406 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RAE1P78406 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RAE1P78406 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.7□□□□□ -1.5
RAE1P78406 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RAE1P78406 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RAE1P78406 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RAE1P78406 RN7SKP250-201ENST00000363924 321 ntBASIC5.7□□□□□ -1.5
RAE1P78406 RNA5SP279-201ENST00000365513 117 ntBASIC5.7□□□□□ -1.5
RAE1P78406 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RAE1P78406 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.7□□□□□ -1.5
RAE1P78406 GSTA12P-201ENST00000402398 508 ntBASIC5.7□□□□□ -1.5
RAE1P78406 NPM1P38-201ENST00000403835 865 ntBASIC5.7□□□□□ -1.5
RAE1P78406 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.7□□□□□ -1.5
RAE1P78406 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RAE1P78406 OR51A6P-201ENST00000418680 1004 ntBASIC5.7□□□□□ -1.5
RAE1P78406 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.7□□□□□ -1.5
RAE1P78406 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.7□□□□□ -1.5
RAE1P78406 RPL7AP14-201ENST00000424041 802 ntBASIC5.7□□□□□ -1.5
RAE1P78406 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.7□□□□□ -1.5
RAE1P78406 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.7□□□□□ -1.5
RAE1P78406 RPL12P16-201ENST00000431098 498 ntBASIC5.7□□□□□ -1.5
RAE1P78406 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.7□□□□□ -1.5
RAE1P78406 MTND2P2-201ENST00000434633 945 ntBASIC5.7□□□□□ -1.5
RAE1P78406 AC073410.1-201ENST00000435125 589 ntBASIC5.7□□□□□ -1.5
RAE1P78406 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.7□□□□□ -1.5
RAE1P78406 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.7□□□□□ -1.5
RAE1P78406 RPL7P55-201ENST00000450522 746 ntBASIC5.7□□□□□ -1.5
RAE1P78406 AC104982.1-201ENST00000478775 574 ntBASIC5.7□□□□□ -1.5
RAE1P78406 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.7□□□□□ -1.5
RAE1P78406 RN7SL423P-201ENST00000486202 304 ntBASIC5.7□□□□□ -1.5
RAE1P78406 RN7SL568P-201ENST00000493069 298 ntBASIC5.7□□□□□ -1.5
RAE1P78406 RN7SL612P-201ENST00000497704 295 ntBASIC5.7□□□□□ -1.5
RAE1P78406 AC021087.2-201ENST00000504656 1203 ntBASIC5.7□□□□□ -1.5
RAE1P78406 AC112484.3-201ENST00000505910 329 ntBASIC5.7□□□□□ -1.5
RAE1P78406 AC138409.2-202ENST00000507274 458 ntBASIC5.7□□□□□ -1.5
RAE1P78406 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.7□□□□□ -1.5
RAE1P78406 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RAE1P78406 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.7□□□□□ -1.5
RAE1P78406 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RAE1P78406 AP003066.2-201ENST00000529375 555 ntBASIC5.7□□□□□ -1.5
RAE1P78406 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.7□□□□□ -1.5
RAE1P78406 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
RAE1P78406 NPM1P42-201ENST00000560329 862 ntBASIC5.7□□□□□ -1.5
RAE1P78406 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.7□□□□□ -1.5
RAE1P78406 AGGF1P9-201ENST00000561884 913 ntBASIC5.7□□□□□ -1.5
RAE1P78406 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.7□□□□□ -1.5
RAE1P78406 DHFRP1-201ENST00000579682 559 ntBASIC5.7□□□□□ -1.5
RAE1P78406 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.7□□□□□ -1.5
RAE1P78406 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.7□□□□□ -1.5
RAE1P78406 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.7□□□□□ -1.5
RAE1P78406 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.7□□□□□ -1.5
RAE1P78406 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.7□□□□□ -1.5
RAE1P78406 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.7□□□□□ -1.5
RAE1P78406 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.7□□□□□ -1.5
RAE1P78406 AC068768.2-201ENST00000602352 343 ntBASIC5.7□□□□□ -1.5
RAE1P78406 uc_338.31-201ENST00000615595 186 ntBASIC5.7□□□□□ -1.5
RAE1P78406 SNX18P12-201ENST00000624821 759 ntBASIC5.7□□□□□ -1.5
RAE1P78406 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.7□□□□□ -1.5
RAE1P78406 AL357140.4-201ENST00000636827 412 ntBASIC5.7□□□□□ -1.5
RAE1P78406 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.7□□□□□ -1.5
RAE1P78406 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.7□□□□□ -1.5
RAE1P78406 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.7□□□□□ -1.5
RAE1P78406 AC112255.1-201ENST00000624070 2493 ntBASIC5.7□□□□□ -1.5
RAE1P78406 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RAE1P78406 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RAE1P78406 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.7□□□□□ -1.5
RAE1P78406 AC009135.2-201ENST00000624136 1768 ntBASIC5.7□□□□□ -1.5
RAE1P78406 AP000547.3-204ENST00000588548 2523 ntBASIC5.7□□□□□ -1.5
RAE1P78406 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RAE1P78406 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
RAE1P78406 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
RAE1P78406 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.69□□□□□ -1.5
RAE1P78406 ZNF90P1-201ENST00000480493 1951 ntBASIC5.69□□□□□ -1.5
RAE1P78406 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms