Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC4.93□□□□□ -1.62
ACTBP60709 AC073488.3-201ENST00000631611 778 ntBASIC4.93□□□□□ -1.62
ACTBP60709 STX3-208ENST00000641815 3236 ntBASIC4.93□□□□□ -1.62
ACTBP60709 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ACTBP60709 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
ACTBP60709 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
ACTBP60709 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
ACTBP60709 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
ACTBP60709 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.93□□□□□ -1.62
ACTBP60709 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ACTBP60709 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ACTBP60709 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
ACTBP60709 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.92□□□□□ -1.62
ACTBP60709 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.92□□□□□ -1.62
ACTBP60709 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
ACTBP60709 CASC19-238ENST00000641523 1558 ntBASIC4.92□□□□□ -1.62
ACTBP60709 AC112198.2-201ENST00000426589 6996 ntBASIC4.92□□□□□ -1.62
ACTBP60709 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.92□□□□□ -1.62
ACTBP60709 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
ACTBP60709 AC007068.1-201ENST00000396690 844 ntBASIC4.92□□□□□ -1.62
ACTBP60709 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.92□□□□□ -1.62
ACTBP60709 AL034379.1-201ENST00000423216 253 ntBASIC4.92□□□□□ -1.62
ACTBP60709 AC092865.3-201ENST00000425390 1026 ntBASIC4.92□□□□□ -1.62
ACTBP60709 RPSAP65-201ENST00000429660 595 ntBASIC4.92□□□□□ -1.62
ACTBP60709 TMEM183AP1-205ENST00000432739 290 ntBASIC4.92□□□□□ -1.62
ACTBP60709 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC4.92□□□□□ -1.62
ACTBP60709 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC4.92□□□□□ -1.62
ACTBP60709 TRIM60P16-201ENST00000444048 694 ntBASIC4.92□□□□□ -1.62
ACTBP60709 AL590004.3-202ENST00000445883 451 ntBASIC4.92□□□□□ -1.62
ACTBP60709 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC4.92□□□□□ -1.62
ACTBP60709 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.92□□□□□ -1.62
ACTBP60709 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC4.92□□□□□ -1.62
ACTBP60709 OR9N1P-201ENST00000491296 333 ntBASIC4.92□□□□□ -1.62
ACTBP60709 AC093890.1-201ENST00000502554 540 ntBASIC4.92□□□□□ -1.62
ACTBP60709 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.92□□□□□ -1.62
ACTBP60709 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.92□□□□□ -1.62
ACTBP60709 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC4.92□□□□□ -1.62
ACTBP60709 AC110056.1-201ENST00000525759 911 ntBASIC4.92□□□□□ -1.62
ACTBP60709 AC036111.2-201ENST00000533247 901 ntBASIC4.92□□□□□ -1.62
ACTBP60709 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.92□□□□□ -1.62
ACTBP60709 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC4.92□□□□□ -1.62
ACTBP60709 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC4.92□□□□□ -1.62
ACTBP60709 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC4.92□□□□□ -1.62
ACTBP60709 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.92□□□□□ -1.62
ACTBP60709 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC4.92□□□□□ -1.62
ACTBP60709 AC010632.3-201ENST00000611377 369 ntBASIC4.92□□□□□ -1.62
ACTBP60709 AL139407.1-201ENST00000613826 1175 ntBASIC4.92□□□□□ -1.62
ACTBP60709 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.92□□□□□ -1.62
ACTBP60709 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
ACTBP60709 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.92□□□□□ -1.62
ACTBP60709 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
ACTBP60709 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
ACTBP60709 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ACTBP60709 AC117409.1-201ENST00000470499 1310 ntBASIC4.92□□□□□ -1.62
ACTBP60709 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
ACTBP60709 AC119674.1-202ENST00000641333 1860 ntBASIC4.92□□□□□ -1.62
ACTBP60709 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.92□□□□□ -1.62
ACTBP60709 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.92□□□□□ -1.62
ACTBP60709 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ACTBP60709 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
ACTBP60709 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ACTBP60709 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.91□□□□□ -1.62
ACTBP60709 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ACTBP60709 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
ACTBP60709 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.91□□□□□ -1.62
ACTBP60709 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
ACTBP60709 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ACTBP60709 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
ACTBP60709 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ACTBP60709 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.91□□□□□ -1.62
ACTBP60709 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
ACTBP60709 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
ACTBP60709 AL606537.1-201ENST00000607258 2011 ntBASIC4.91□□□□□ -1.62
ACTBP60709 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
ACTBP60709 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
ACTBP60709 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ACTBP60709 YWHAZP6-201ENST00000399764 738 ntBASIC4.91□□□□□ -1.62
ACTBP60709 RNA5SP431-201ENST00000410312 120 ntBASIC4.91□□□□□ -1.62
ACTBP60709 RPS14P4-201ENST00000415880 418 ntBASIC4.91□□□□□ -1.62
ACTBP60709 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.91□□□□□ -1.62
ACTBP60709 RPS4XP5-201ENST00000419038 768 ntBASIC4.91□□□□□ -1.62
ACTBP60709 PTP4A1P1-201ENST00000420539 515 ntBASIC4.91□□□□□ -1.62
ACTBP60709 AL445928.1-201ENST00000435545 222 ntBASIC4.91□□□□□ -1.62
ACTBP60709 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.91□□□□□ -1.62
ACTBP60709 SEPT14P12-201ENST00000442280 560 ntBASIC4.91□□□□□ -1.62
ACTBP60709 AC023141.8-201ENST00000442554 208 ntBASIC4.91□□□□□ -1.62
ACTBP60709 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC4.91□□□□□ -1.62
ACTBP60709 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.91□□□□□ -1.62
ACTBP60709 AC010240.2-201ENST00000445363 1205 ntBASIC4.91□□□□□ -1.62
ACTBP60709 RN7SL254P-201ENST00000460609 284 ntBASIC4.91□□□□□ -1.62
ACTBP60709 RPS7P6-201ENST00000485777 579 ntBASIC4.91□□□□□ -1.62
ACTBP60709 COX6B1P2-201ENST00000489624 230 ntBASIC4.91□□□□□ -1.62
ACTBP60709 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.91□□□□□ -1.62
ACTBP60709 AC008629.2-201ENST00000503783 483 ntBASIC4.91□□□□□ -1.62
ACTBP60709 AC112484.3-201ENST00000505910 329 ntBASIC4.91□□□□□ -1.62
ACTBP60709 HMGN1P17-201ENST00000513734 295 ntBASIC4.91□□□□□ -1.62
ACTBP60709 MAST4-IT1-201ENST00000514241 658 ntBASIC4.91□□□□□ -1.62
ACTBP60709 SEPT10P1-201ENST00000517342 1162 ntBASIC4.91□□□□□ -1.62
ACTBP60709 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
ACTBP60709 AC137627.1-201ENST00000545761 289 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms