Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 AL139100.1-201ENST00000408001 498 ntBASIC5□□□□□ -1.61
HOXA1P49639 RN7SKP129-201ENST00000410288 299 ntBASIC5□□□□□ -1.61
HOXA1P49639 RN7SKP221-201ENST00000410420 301 ntBASIC5□□□□□ -1.61
HOXA1P49639 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5□□□□□ -1.61
HOXA1P49639 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXA1P49639 CDC42P6-201ENST00000421246 576 ntBASIC5□□□□□ -1.61
HOXA1P49639 AC019205.1-201ENST00000421830 730 ntBASIC5□□□□□ -1.61
HOXA1P49639 AL121882.1-201ENST00000422893 417 ntBASIC5□□□□□ -1.61
HOXA1P49639 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5□□□□□ -1.61
HOXA1P49639 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5□□□□□ -1.61
HOXA1P49639 MED28P4-201ENST00000433137 572 ntBASIC5□□□□□ -1.61
HOXA1P49639 AC073410.1-201ENST00000435125 589 ntBASIC5□□□□□ -1.61
HOXA1P49639 MTND2P21-201ENST00000436242 1042 ntBASIC5□□□□□ -1.61
HOXA1P49639 ELOCP3-201ENST00000439303 348 ntBASIC5□□□□□ -1.61
HOXA1P49639 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5□□□□□ -1.61
HOXA1P49639 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5□□□□□ -1.61
HOXA1P49639 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5□□□□□ -1.61
HOXA1P49639 AL845321.1-201ENST00000444603 348 ntBASIC5□□□□□ -1.61
HOXA1P49639 AL020997.1-201ENST00000446554 349 ntBASIC5□□□□□ -1.61
HOXA1P49639 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5□□□□□ -1.61
HOXA1P49639 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5□□□□□ -1.61
HOXA1P49639 CBX1P2-201ENST00000453841 458 ntBASIC5□□□□□ -1.61
HOXA1P49639 AC022336.1-201ENST00000475510 337 ntBASIC5□□□□□ -1.61
HOXA1P49639 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5□□□□□ -1.61
HOXA1P49639 AC018639.1-201ENST00000492994 442 ntBASIC5□□□□□ -1.61
HOXA1P49639 AC093801.2-201ENST00000503966 1050 ntBASIC5□□□□□ -1.61
HOXA1P49639 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5□□□□□ -1.61
HOXA1P49639 MTCO1P31-201ENST00000506355 492 ntBASIC5□□□□□ -1.61
HOXA1P49639 AC108157.1-201ENST00000510511 539 ntBASIC5□□□□□ -1.61
HOXA1P49639 CFI-204ENST00000510800 667 ntTSL 2 BASIC5□□□□□ -1.61
HOXA1P49639 Vault.2-201ENST00000516519 98 ntBASIC5□□□□□ -1.61
HOXA1P49639 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5□□□□□ -1.61
HOXA1P49639 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5□□□□□ -1.61
HOXA1P49639 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5□□□□□ -1.61
HOXA1P49639 AC008147.3-201ENST00000548666 354 ntBASIC5□□□□□ -1.61
HOXA1P49639 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5□□□□□ -1.61
HOXA1P49639 TPRX1P1-201ENST00000557620 319 ntBASIC5□□□□□ -1.61
HOXA1P49639 AC026956.1-201ENST00000558741 396 ntBASIC5□□□□□ -1.61
HOXA1P49639 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5□□□□□ -1.61
HOXA1P49639 MIR4760-201ENST00000585040 80 ntBASIC5□□□□□ -1.61
HOXA1P49639 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5□□□□□ -1.61
HOXA1P49639 NPIPB1P-202ENST00000588786 828 ntBASIC5□□□□□ -1.61
HOXA1P49639 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HOXA1P49639 AL589863.1-201ENST00000595383 631 ntBASIC5□□□□□ -1.61
HOXA1P49639 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
HOXA1P49639 AC073046.2-201ENST00000604756 527 ntBASIC5□□□□□ -1.61
HOXA1P49639 AC114477.1-201ENST00000605097 605 ntBASIC5□□□□□ -1.61
HOXA1P49639 AC004890.3-201ENST00000605566 1095 ntBASIC5□□□□□ -1.61
HOXA1P49639 AC034229.4-201ENST00000607861 441 ntBASIC5□□□□□ -1.61
HOXA1P49639 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXA1P49639 AC117503.3-201ENST00000623811 601 ntBASIC5□□□□□ -1.61
HOXA1P49639 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5□□□□□ -1.61
HOXA1P49639 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5□□□□□ -1.61
HOXA1P49639 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HOXA1P49639 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HOXA1P49639 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC5□□□□□ -1.61
HOXA1P49639 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5□□□□□ -1.61
HOXA1P49639 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HOXA1P49639 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5□□□□□ -1.61
HOXA1P49639 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
HOXA1P49639 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5□□□□□ -1.61
HOXA1P49639 AC004023.1-201ENST00000561473 1744 ntBASIC5□□□□□ -1.61
HOXA1P49639 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HOXA1P49639 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXA1P49639 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.99□□□□□ -1.61
HOXA1P49639 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXA1P49639 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HOXA1P49639 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HOXA1P49639 AC009220.2-201ENST00000489759 1751 ntBASIC4.99□□□□□ -1.61
HOXA1P49639 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXA1P49639 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXA1P49639 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
HOXA1P49639 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HOXA1P49639 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.99□□□□□ -1.61
HOXA1P49639 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HOXA1P49639 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXA1P49639 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXA1P49639 RNU1-146P-201ENST00000364015 165 ntBASIC4.99□□□□□ -1.61
HOXA1P49639 RNU1-84P-201ENST00000365447 164 ntBASIC4.99□□□□□ -1.61
HOXA1P49639 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXA1P49639 NMD3P2-201ENST00000421815 761 ntBASIC4.99□□□□□ -1.61
HOXA1P49639 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXA1P49639 MORF4L1P7-201ENST00000426038 703 ntBASIC4.99□□□□□ -1.61
HOXA1P49639 AC083862.1-201ENST00000427378 1242 ntBASIC4.99□□□□□ -1.61
HOXA1P49639 MRPL50P1-201ENST00000431951 384 ntBASIC4.99□□□□□ -1.61
HOXA1P49639 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXA1P49639 AC092447.2-201ENST00000435487 669 ntBASIC4.99□□□□□ -1.61
HOXA1P49639 Z99127.2-201ENST00000441426 334 ntBASIC4.99□□□□□ -1.61
HOXA1P49639 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.99□□□□□ -1.61
HOXA1P49639 AC012512.1-201ENST00000446594 718 ntBASIC4.99□□□□□ -1.61
HOXA1P49639 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.99□□□□□ -1.61
HOXA1P49639 TREML3P-201ENST00000457327 501 ntBASIC4.99□□□□□ -1.61
HOXA1P49639 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXA1P49639 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC4.99□□□□□ -1.61
HOXA1P49639 ATP5G1P3-201ENST00000463301 410 ntBASIC4.99□□□□□ -1.61
HOXA1P49639 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.99□□□□□ -1.61
HOXA1P49639 RPS3AP49-201ENST00000472161 790 ntBASIC4.99□□□□□ -1.61
HOXA1P49639 AL079303.1-201ENST00000486611 463 ntBASIC4.99□□□□□ -1.61
HOXA1P49639 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HOXA1P49639 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms