Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
LHX1P48742 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
LHX1P48742 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.01□□□□□ -1.45
LHX1P48742 RN7SKP124-201ENST00000364730 341 ntBASIC6.01□□□□□ -1.45
LHX1P48742 AL451142.1-201ENST00000375867 775 ntBASIC6.01□□□□□ -1.45
LHX1P48742 AL050305.1-201ENST00000399993 1230 ntBASIC6.01□□□□□ -1.45
LHX1P48742 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.01□□□□□ -1.45
LHX1P48742 CASKP1-201ENST00000412870 582 ntBASIC6.01□□□□□ -1.45
LHX1P48742 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.01□□□□□ -1.45
LHX1P48742 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6.01□□□□□ -1.45
LHX1P48742 UBE2V2P3-201ENST00000433562 437 ntBASIC6.01□□□□□ -1.45
LHX1P48742 AC006335.2-201ENST00000437993 330 ntBASIC6.01□□□□□ -1.45
LHX1P48742 AC128716.1-201ENST00000475129 166 ntBASIC6.01□□□□□ -1.45
LHX1P48742 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
LHX1P48742 DUTP7-201ENST00000507982 486 ntBASIC6.01□□□□□ -1.45
LHX1P48742 AC011411.1-201ENST00000509592 876 ntBASIC6.01□□□□□ -1.45
LHX1P48742 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.01□□□□□ -1.45
LHX1P48742 OR4A6P-201ENST00000534364 970 ntBASIC6.01□□□□□ -1.45
LHX1P48742 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
LHX1P48742 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.01□□□□□ -1.45
LHX1P48742 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC6.01□□□□□ -1.45
LHX1P48742 MRPS21P7-201ENST00000566937 238 ntBASIC6.01□□□□□ -1.45
LHX1P48742 AC015720.2-201ENST00000567709 334 ntBASIC6.01□□□□□ -1.45
LHX1P48742 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.01□□□□□ -1.45
LHX1P48742 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.01□□□□□ -1.45
LHX1P48742 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
LHX1P48742 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
LHX1P48742 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.01□□□□□ -1.45
LHX1P48742 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
LHX1P48742 AL049634.1-201ENST00000453770 1720 ntBASIC6.01□□□□□ -1.45
LHX1P48742 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
LHX1P48742 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
LHX1P48742 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
LHX1P48742 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
LHX1P48742 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
LHX1P48742 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.01□□□□□ -1.45
LHX1P48742 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
LHX1P48742 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6□□□□□ -1.45
LHX1P48742 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LHX1P48742 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6□□□□□ -1.45
LHX1P48742 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LHX1P48742 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
LHX1P48742 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
LHX1P48742 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6□□□□□ -1.45
LHX1P48742 RNU4-2-201ENST00000365668 141 ntBASIC6□□□□□ -1.45
LHX1P48742 RNU1-136P-201ENST00000384181 164 ntBASIC6□□□□□ -1.45
LHX1P48742 U3.25-201ENST00000391209 220 ntBASIC6□□□□□ -1.45
LHX1P48742 AC240504.1-201ENST00000395709 845 ntBASIC6□□□□□ -1.45
LHX1P48742 OR3A2-201ENST00000408891 1076 ntBASIC6□□□□□ -1.45
LHX1P48742 AC079355.1-201ENST00000421770 223 ntBASIC6□□□□□ -1.45
LHX1P48742 KRT8P51-201ENST00000438938 274 ntBASIC6□□□□□ -1.45
LHX1P48742 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6□□□□□ -1.45
LHX1P48742 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6□□□□□ -1.45
LHX1P48742 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6□□□□□ -1.45
LHX1P48742 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6□□□□□ -1.45
LHX1P48742 AP000547.1-201ENST00000454360 617 ntBASIC6□□□□□ -1.45
LHX1P48742 RPL12P39-201ENST00000455456 496 ntBASIC6□□□□□ -1.45
LHX1P48742 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6□□□□□ -1.45
LHX1P48742 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6□□□□□ -1.45
LHX1P48742 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6□□□□□ -1.45
LHX1P48742 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6□□□□□ -1.45
LHX1P48742 AC113398.2-201ENST00000507630 558 ntBASIC6□□□□□ -1.45
LHX1P48742 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6□□□□□ -1.45
LHX1P48742 RPL7L1P4-201ENST00000513004 707 ntBASIC6□□□□□ -1.45
LHX1P48742 SNORD116-30-201ENST00000516468 85 ntBASIC6□□□□□ -1.45
LHX1P48742 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6□□□□□ -1.45
LHX1P48742 AC025857.1-201ENST00000525252 377 ntBASIC6□□□□□ -1.45
LHX1P48742 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6□□□□□ -1.45
LHX1P48742 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6□□□□□ -1.45
LHX1P48742 PPATP2-201ENST00000605635 508 ntBASIC6□□□□□ -1.45
LHX1P48742 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6□□□□□ -1.45
LHX1P48742 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6□□□□□ -1.45
LHX1P48742 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6□□□□□ -1.45
LHX1P48742 PWAR1-201ENST00000624188 2414 ntBASIC6□□□□□ -1.45
LHX1P48742 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6□□□□□ -1.45
LHX1P48742 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
LHX1P48742 AC073365.1-203ENST00000641055 1992 ntBASIC6□□□□□ -1.45
LHX1P48742 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
LHX1P48742 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LHX1P48742 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
LHX1P48742 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6□□□□□ -1.45
LHX1P48742 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
LHX1P48742 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
LHX1P48742 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LHX1P48742 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.99□□□□□ -1.45
LHX1P48742 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LHX1P48742 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LHX1P48742 TTC41P-205ENST00000551270 3963 ntBASIC5.99□□□□□ -1.45
LHX1P48742 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LHX1P48742 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LHX1P48742 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
LHX1P48742 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
LHX1P48742 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LHX1P48742 AC007342.9-201ENST00000623877 1385 ntBASIC5.99□□□□□ -1.45
LHX1P48742 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.99□□□□□ -1.45
LHX1P48742 RNA5SP132-201ENST00000364725 118 ntBASIC5.99□□□□□ -1.45
LHX1P48742 AC013268.2-201ENST00000420753 337 ntBASIC5.99□□□□□ -1.45
LHX1P48742 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LHX1P48742 BX119904.3-201ENST00000428194 957 ntBASIC5.99□□□□□ -1.45
LHX1P48742 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms