Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.38□□□□□ -1.55
SOX2P48431 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.38□□□□□ -1.55
SOX2P48431 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.38□□□□□ -1.55
SOX2P48431 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.38□□□□□ -1.55
SOX2P48431 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.38□□□□□ -1.55
SOX2P48431 DSTNP5-201ENST00000427921 523 ntBASIC5.38□□□□□ -1.55
SOX2P48431 RPL12P16-201ENST00000431098 498 ntBASIC5.38□□□□□ -1.55
SOX2P48431 MTND2P5-201ENST00000432656 1006 ntBASIC5.38□□□□□ -1.55
SOX2P48431 AL138787.1-202ENST00000437804 898 ntBASIC5.38□□□□□ -1.55
SOX2P48431 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.38□□□□□ -1.55
SOX2P48431 ARF4P4-201ENST00000439608 520 ntBASIC5.38□□□□□ -1.55
SOX2P48431 AL353898.1-201ENST00000444055 238 ntBASIC5.38□□□□□ -1.55
SOX2P48431 RPS27P5-201ENST00000444247 244 ntBASIC5.38□□□□□ -1.55
SOX2P48431 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SOX2P48431 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.38□□□□□ -1.55
SOX2P48431 AL929410.2-201ENST00000451170 189 ntBASIC5.38□□□□□ -1.55
SOX2P48431 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.38□□□□□ -1.55
SOX2P48431 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.38□□□□□ -1.55
SOX2P48431 RN7SL369P-201ENST00000477138 299 ntBASIC5.38□□□□□ -1.55
SOX2P48431 AC124945.1-201ENST00000485133 188 ntBASIC5.38□□□□□ -1.55
SOX2P48431 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.38□□□□□ -1.55
SOX2P48431 AC010374.1-201ENST00000503762 1237 ntBASIC5.38□□□□□ -1.55
SOX2P48431 AC020699.1-201ENST00000505161 445 ntBASIC5.38□□□□□ -1.55
SOX2P48431 BOLA3P3-201ENST00000505182 232 ntBASIC5.38□□□□□ -1.55
SOX2P48431 ASNSP4-201ENST00000511103 447 ntBASIC5.38□□□□□ -1.55
SOX2P48431 AC093664.1-201ENST00000511779 289 ntBASIC5.38□□□□□ -1.55
SOX2P48431 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.38□□□□□ -1.55
SOX2P48431 RNA5SP418-201ENST00000515951 117 ntBASIC5.38□□□□□ -1.55
SOX2P48431 SNORA19.3-201ENST00000516165 130 ntBASIC5.38□□□□□ -1.55
SOX2P48431 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.38□□□□□ -1.55
SOX2P48431 TPM3P3-201ENST00000521343 354 ntBASIC5.38□□□□□ -1.55
SOX2P48431 HAUS1P3-201ENST00000523909 662 ntBASIC5.38□□□□□ -1.55
SOX2P48431 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
SOX2P48431 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.38□□□□□ -1.55
SOX2P48431 AP000916.1-201ENST00000533869 835 ntBASIC5.38□□□□□ -1.55
SOX2P48431 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.38□□□□□ -1.55
SOX2P48431 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.38□□□□□ -1.55
SOX2P48431 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.38□□□□□ -1.55
SOX2P48431 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.38□□□□□ -1.55
SOX2P48431 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.38□□□□□ -1.55
SOX2P48431 SNX6P1-201ENST00000601728 1224 ntBASIC5.38□□□□□ -1.55
SOX2P48431 AC234772.3-201ENST00000602277 528 ntBASIC5.38□□□□□ -1.55
SOX2P48431 NDUFB9P1-201ENST00000604683 510 ntBASIC5.38□□□□□ -1.55
SOX2P48431 AC097065.2-201ENST00000608159 533 ntBASIC5.38□□□□□ -1.55
SOX2P48431 AC245100.7-201ENST00000609678 442 ntBASIC5.38□□□□□ -1.55
SOX2P48431 AL157392.4-201ENST00000609756 345 ntBASIC5.38□□□□□ -1.55
SOX2P48431 MIR8082-201ENST00000612488 81 ntBASIC5.38□□□□□ -1.55
SOX2P48431 AC105105.5-201ENST00000622635 1294 ntBASIC5.38□□□□□ -1.55
SOX2P48431 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.38□□□□□ -1.55
SOX2P48431 AC006963.1-201ENST00000624003 1052 ntBASIC5.38□□□□□ -1.55
SOX2P48431 AP000676.4-201ENST00000624659 623 ntBASIC5.38□□□□□ -1.55
SOX2P48431 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.38□□□□□ -1.55
SOX2P48431 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.38□□□□□ -1.55
SOX2P48431 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SOX2P48431 KYNUP3-201ENST00000574386 1341 ntBASIC5.38□□□□□ -1.55
SOX2P48431 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SOX2P48431 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SOX2P48431 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SOX2P48431 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.38□□□□□ -1.55
SOX2P48431 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SOX2P48431 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.38□□□□□ -1.55
SOX2P48431 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.38□□□□□ -1.55
SOX2P48431 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.38□□□□□ -1.55
SOX2P48431 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SOX2P48431 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.38□□□□□ -1.55
SOX2P48431 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.38□□□□□ -1.55
SOX2P48431 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SOX2P48431 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SOX2P48431 MSL3P1-202ENST00000440028 1468 ntBASIC5.38□□□□□ -1.55
SOX2P48431 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
SOX2P48431 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.38□□□□□ -1.55
SOX2P48431 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SOX2P48431 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.38□□□□□ -1.55
SOX2P48431 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.38□□□□□ -1.55
SOX2P48431 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
SOX2P48431 AC079298.1-201ENST00000625026 1619 ntBASIC5.37□□□□□ -1.55
SOX2P48431 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SOX2P48431 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SOX2P48431 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SOX2P48431 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
SOX2P48431 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SOX2P48431 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.37□□□□□ -1.55
SOX2P48431 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SOX2P48431 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SOX2P48431 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SOX2P48431 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SOX2P48431 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SOX2P48431 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SOX2P48431 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.37□□□□□ -1.55
SOX2P48431 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SOX2P48431 RNA5SP514-201ENST00000363717 111 ntBASIC5.37□□□□□ -1.55
SOX2P48431 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.37□□□□□ -1.55
SOX2P48431 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SOX2P48431 RNU6-31P-201ENST00000384388 108 ntBASIC5.37□□□□□ -1.55
SOX2P48431 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SOX2P48431 AL139100.1-201ENST00000408001 498 ntBASIC5.37□□□□□ -1.55
SOX2P48431 AL139135.1-201ENST00000412675 209 ntBASIC5.37□□□□□ -1.55
SOX2P48431 MTATP6P20-201ENST00000414147 562 ntBASIC5.37□□□□□ -1.55
SOX2P48431 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.37□□□□□ -1.55
SOX2P48431 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms