Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC020633.1-201ENST00000468439 2247 ntBASIC4.96□□□□□ -1.62
CDX1P47902 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDX1P47902 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDX1P47902 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.96□□□□□ -1.62
CDX1P47902 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CDX1P47902 AC114876.1-201ENST00000490962 1366 ntBASIC4.96□□□□□ -1.62
CDX1P47902 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.96□□□□□ -1.62
CDX1P47902 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CDX1P47902 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDX1P47902 SNORD1C-201ENST00000363315 78 ntBASIC4.96□□□□□ -1.62
CDX1P47902 RNU1-65P-201ENST00000363919 148 ntBASIC4.96□□□□□ -1.62
CDX1P47902 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDX1P47902 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.96□□□□□ -1.62
CDX1P47902 RNU6-40P-201ENST00000384254 107 ntBASIC4.96□□□□□ -1.62
CDX1P47902 CAV1-204ENST00000393470 598 ntTSL 4 BASIC4.96□□□□□ -1.62
CDX1P47902 EI24P3-201ENST00000399046 1062 ntBASIC4.96□□□□□ -1.62
CDX1P47902 AL136131.1-201ENST00000406079 803 ntBASIC4.96□□□□□ -1.62
CDX1P47902 SNORA11.5-201ENST00000408163 128 ntBASIC4.96□□□□□ -1.62
CDX1P47902 RPL26P37-201ENST00000411983 438 ntBASIC4.96□□□□□ -1.62
CDX1P47902 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.96□□□□□ -1.62
CDX1P47902 DHFRP2-201ENST00000414224 547 ntBASIC4.96□□□□□ -1.62
CDX1P47902 AL590806.1-201ENST00000415818 853 ntBASIC4.96□□□□□ -1.62
CDX1P47902 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC4.96□□□□□ -1.62
CDX1P47902 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC4.96□□□□□ -1.62
CDX1P47902 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC4.96□□□□□ -1.62
CDX1P47902 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC4.96□□□□□ -1.62
CDX1P47902 AKR1B10P1-201ENST00000425765 942 ntBASIC4.96□□□□□ -1.62
CDX1P47902 RPL23AP4-201ENST00000427757 463 ntBASIC4.96□□□□□ -1.62
CDX1P47902 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDX1P47902 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.96□□□□□ -1.62
CDX1P47902 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC4.96□□□□□ -1.62
CDX1P47902 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.96□□□□□ -1.62
CDX1P47902 RPL7L1P3-201ENST00000455249 689 ntBASIC4.96□□□□□ -1.62
CDX1P47902 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.62
CDX1P47902 OR7E22P-201ENST00000478335 1035 ntBASIC4.96□□□□□ -1.62
CDX1P47902 AC021006.1-201ENST00000489849 553 ntBASIC4.96□□□□□ -1.62
CDX1P47902 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC4.96□□□□□ -1.62
CDX1P47902 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.96□□□□□ -1.62
CDX1P47902 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.96□□□□□ -1.62
CDX1P47902 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC4.96□□□□□ -1.62
CDX1P47902 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.96□□□□□ -1.62
CDX1P47902 IGKV1D-22-201ENST00000518953 324 ntBASIC4.96□□□□□ -1.62
CDX1P47902 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC4.96□□□□□ -1.62
CDX1P47902 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC4.96□□□□□ -1.62
CDX1P47902 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.96□□□□□ -1.62
CDX1P47902 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.96□□□□□ -1.62
CDX1P47902 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.96□□□□□ -1.62
CDX1P47902 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.96□□□□□ -1.62
CDX1P47902 OR8Q1P-201ENST00000526467 655 ntBASIC4.96□□□□□ -1.62
CDX1P47902 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC4.96□□□□□ -1.62
CDX1P47902 NPIPB14P-203ENST00000532298 987 ntBASIC4.96□□□□□ -1.62
CDX1P47902 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.96□□□□□ -1.62
CDX1P47902 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.96□□□□□ -1.62
CDX1P47902 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.96□□□□□ -1.62
CDX1P47902 MIR4660-201ENST00000583549 74 ntBASIC4.96□□□□□ -1.62
CDX1P47902 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CDX1P47902 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDX1P47902 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC4.96□□□□□ -1.62
CDX1P47902 AC068020.1-201ENST00000594215 661 ntBASIC4.96□□□□□ -1.62
CDX1P47902 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC4.96□□□□□ -1.62
CDX1P47902 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.96□□□□□ -1.62
CDX1P47902 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.96□□□□□ -1.62
CDX1P47902 AC130352.1-201ENST00000602979 661 ntBASIC4.96□□□□□ -1.62
CDX1P47902 AL355802.4-201ENST00000607635 548 ntBASIC4.96□□□□□ -1.62
CDX1P47902 AL135999.3-201ENST00000610501 812 ntBASIC4.96□□□□□ -1.62
CDX1P47902 MIR6721-201ENST00000617181 87 ntBASIC4.96□□□□□ -1.62
CDX1P47902 MRPL57P1-201ENST00000621486 265 ntBASIC4.96□□□□□ -1.62
CDX1P47902 AC073593.1-201ENST00000624500 411 ntBASIC4.96□□□□□ -1.62
CDX1P47902 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC4.96□□□□□ -1.62
CDX1P47902 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDX1P47902 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.96□□□□□ -1.62
CDX1P47902 ING3-204ENST00000431467 1447 ntTSL 2 BASIC4.96□□□□□ -1.62
CDX1P47902 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CDX1P47902 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
CDX1P47902 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC4.96□□□□□ -1.62
CDX1P47902 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDX1P47902 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDX1P47902 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
CDX1P47902 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CDX1P47902 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC4.95□□□□□ -1.62
CDX1P47902 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CDX1P47902 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.95□□□□□ -1.62
CDX1P47902 AL022311.1-201ENST00000623726 19416 ntBASIC4.95□□□□□ -1.62
CDX1P47902 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
CDX1P47902 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDX1P47902 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CDX1P47902 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDX1P47902 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDX1P47902 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDX1P47902 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDX1P47902 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CDX1P47902 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.95□□□□□ -1.62
CDX1P47902 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
CDX1P47902 BRAFP1-201ENST00000445336 2703 ntBASIC4.95□□□□□ -1.62
CDX1P47902 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CDX1P47902 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
CDX1P47902 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.95□□□□□ -1.62
CDX1P47902 AL391422.1-201ENST00000402155 436 ntBASIC4.95□□□□□ -1.62
CDX1P47902 MIR1275-201ENST00000408770 80 ntBASIC4.95□□□□□ -1.62
CDX1P47902 RNA5SP431-201ENST00000410312 120 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms