Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.16□□□□□ -1.42
SSR1P43307 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.16□□□□□ -1.42
SSR1P43307 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.16□□□□□ -1.42
SSR1P43307 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SSR1P43307 AC138907.8-201ENST00000623981 2256 ntBASIC6.16□□□□□ -1.42
SSR1P43307 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.16□□□□□ -1.42
SSR1P43307 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
SSR1P43307 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSR1P43307 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.16□□□□□ -1.42
SSR1P43307 AL354854.1-201ENST00000455940 1363 ntBASIC6.16□□□□□ -1.42
SSR1P43307 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.16□□□□□ -1.42
SSR1P43307 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.16□□□□□ -1.42
SSR1P43307 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.16□□□□□ -1.42
SSR1P43307 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSR1P43307 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
SSR1P43307 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SSR1P43307 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SSR1P43307 SELENOWP1-201ENST00000322792 252 ntBASIC6.15□□□□□ -1.42
SSR1P43307 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
SSR1P43307 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SSR1P43307 MIR130B-202ENST00000385018 82 ntBASIC6.15□□□□□ -1.42
SSR1P43307 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.15□□□□□ -1.42
SSR1P43307 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SSR1P43307 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.15□□□□□ -1.42
SSR1P43307 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.15□□□□□ -1.42
SSR1P43307 CRIP1P1-201ENST00000427567 185 ntBASIC6.15□□□□□ -1.42
SSR1P43307 BX276092.6-201ENST00000430476 250 ntBASIC6.15□□□□□ -1.42
SSR1P43307 AL354893.1-201ENST00000433735 348 ntBASIC6.15□□□□□ -1.42
SSR1P43307 RPS12P17-201ENST00000438591 377 ntBASIC6.15□□□□□ -1.42
SSR1P43307 ATP5LP2-201ENST00000440646 311 ntBASIC6.15□□□□□ -1.42
SSR1P43307 BMS1P10-201ENST00000443754 1120 ntBASIC6.15□□□□□ -1.42
SSR1P43307 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.15□□□□□ -1.42
SSR1P43307 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SSR1P43307 RPL12P39-201ENST00000455456 496 ntBASIC6.15□□□□□ -1.42
SSR1P43307 BX276092.8-201ENST00000455722 250 ntBASIC6.15□□□□□ -1.42
SSR1P43307 RN7SL269P-201ENST00000467795 305 ntBASIC6.15□□□□□ -1.42
SSR1P43307 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.15□□□□□ -1.42
SSR1P43307 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.15□□□□□ -1.42
SSR1P43307 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.15□□□□□ -1.42
SSR1P43307 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.15□□□□□ -1.42
SSR1P43307 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.15□□□□□ -1.42
SSR1P43307 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SSR1P43307 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.15□□□□□ -1.42
SSR1P43307 AC018552.1-201ENST00000562099 811 ntBASIC6.15□□□□□ -1.42
SSR1P43307 AC090826.1-203ENST00000569235 490 ntBASIC6.15□□□□□ -1.42
SSR1P43307 AP005119.1-201ENST00000580956 292 ntBASIC6.15□□□□□ -1.42
SSR1P43307 AC111152.1-202ENST00000635848 339 ntBASIC6.15□□□□□ -1.42
SSR1P43307 AC099654.15-201ENST00000639802 509 ntBASIC6.15□□□□□ -1.42
SSR1P43307 OR11H2-202ENST00000641517 1085 ntBASIC6.15□□□□□ -1.42
SSR1P43307 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.15□□□□□ -1.43
SSR1P43307 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
SSR1P43307 AC093225.1-201ENST00000506867 1408 ntBASIC6.15□□□□□ -1.43
SSR1P43307 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
SSR1P43307 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
SSR1P43307 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SSR1P43307 MFSD8-219ENST00000641228 2559 ntBASIC6.14□□□□□ -1.43
SSR1P43307 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
SSR1P43307 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSR1P43307 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
SSR1P43307 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
SSR1P43307 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSR1P43307 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
SSR1P43307 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSR1P43307 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SSR1P43307 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSR1P43307 AC093775.1-201ENST00000624154 1868 ntBASIC6.14□□□□□ -1.43
SSR1P43307 RN7SKP171-201ENST00000364417 303 ntBASIC6.14□□□□□ -1.43
SSR1P43307 SNORA51.9-201ENST00000384295 124 ntBASIC6.14□□□□□ -1.43
SSR1P43307 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SSR1P43307 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.14□□□□□ -1.43
SSR1P43307 RBMY2AP-201ENST00000445405 1157 ntBASIC6.14□□□□□ -1.43
SSR1P43307 TIMM8BP2-201ENST00000445940 251 ntBASIC6.14□□□□□ -1.43
SSR1P43307 RPL7L1P1-201ENST00000448259 785 ntBASIC6.14□□□□□ -1.43
SSR1P43307 RBMY2CP-201ENST00000448575 1157 ntBASIC6.14□□□□□ -1.43
SSR1P43307 RBMY2DP-202ENST00000448881 1157 ntBASIC6.14□□□□□ -1.43
SSR1P43307 RBMY2BP-202ENST00000451071 1156 ntBASIC6.14□□□□□ -1.43
SSR1P43307 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.14□□□□□ -1.43
SSR1P43307 AC009963.3-201ENST00000458090 486 ntBASIC6.14□□□□□ -1.43
SSR1P43307 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.14□□□□□ -1.43
SSR1P43307 RPL21P6-201ENST00000479171 504 ntBASIC6.14□□□□□ -1.43
SSR1P43307 AC006539.1-201ENST00000481419 501 ntBASIC6.14□□□□□ -1.43
SSR1P43307 AC018797.1-201ENST00000510791 255 ntBASIC6.14□□□□□ -1.43
SSR1P43307 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC6.14□□□□□ -1.43
SSR1P43307 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.14□□□□□ -1.43
SSR1P43307 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.14□□□□□ -1.43
SSR1P43307 AC002519.2-203ENST00000567043 837 ntBASIC6.14□□□□□ -1.43
SSR1P43307 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
SSR1P43307 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.14□□□□□ -1.43
SSR1P43307 AC124916.2-201ENST00000604416 224 ntBASIC6.14□□□□□ -1.43
SSR1P43307 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SSR1P43307 AL355974.3-201ENST00000617383 467 ntBASIC6.14□□□□□ -1.43
SSR1P43307 AC048341.3-201ENST00000619323 491 ntBASIC6.14□□□□□ -1.43
SSR1P43307 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SSR1P43307 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SSR1P43307 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC6.14□□□□□ -1.43
SSR1P43307 FBXL21-201ENST00000297158 1305 ntBASIC6.14□□□□□ -1.43
SSR1P43307 AC004076.2-201ENST00000620532 3323 ntBASIC6.14□□□□□ -1.43
SSR1P43307 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSR1P43307 TRIM51GP-201ENST00000534741 1350 ntBASIC6.14□□□□□ -1.43
SSR1P43307 AC092111.2-201ENST00000611627 1414 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms