Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.35□□□□□ -1.55
APOBEC1P41238 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.35□□□□□ -1.55
APOBEC1P41238 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.35□□□□□ -1.55
APOBEC1P41238 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.35□□□□□ -1.55
APOBEC1P41238 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.35□□□□□ -1.55
APOBEC1P41238 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.35□□□□□ -1.55
APOBEC1P41238 AC129778.1-202ENST00000623812 261 ntBASIC5.35□□□□□ -1.55
APOBEC1P41238 AC079298.2-201ENST00000623885 459 ntBASIC5.35□□□□□ -1.55
APOBEC1P41238 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.35□□□□□ -1.55
APOBEC1P41238 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.35□□□□□ -1.55
APOBEC1P41238 AL591379.1-207ENST00000635982 261 ntBASIC5.35□□□□□ -1.55
APOBEC1P41238 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.35□□□□□ -1.55
APOBEC1P41238 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.35□□□□□ -1.55
APOBEC1P41238 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
APOBEC1P41238 AC092070.2-203ENST00000598377 3644 ntBASIC5.35□□□□□ -1.55
APOBEC1P41238 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.35□□□□□ -1.55
APOBEC1P41238 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
APOBEC1P41238 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
APOBEC1P41238 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
APOBEC1P41238 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.35□□□□□ -1.55
APOBEC1P41238 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
APOBEC1P41238 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
APOBEC1P41238 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.35□□□□□ -1.55
APOBEC1P41238 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
APOBEC1P41238 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
APOBEC1P41238 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.35□□□□□ -1.55
APOBEC1P41238 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
APOBEC1P41238 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
APOBEC1P41238 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
APOBEC1P41238 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
APOBEC1P41238 BX284613.1-201ENST00000452221 1641 ntBASIC5.34□□□□□ -1.55
APOBEC1P41238 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.34□□□□□ -1.55
APOBEC1P41238 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.34□□□□□ -1.55
APOBEC1P41238 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.34□□□□□ -1.55
APOBEC1P41238 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
APOBEC1P41238 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.34□□□□□ -1.55
APOBEC1P41238 SNORD115-48-201ENST00000364764 76 ntBASIC5.34□□□□□ -1.55
APOBEC1P41238 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.34□□□□□ -1.55
APOBEC1P41238 RNU6-40P-201ENST00000384254 107 ntBASIC5.34□□□□□ -1.55
APOBEC1P41238 AC004386.1-201ENST00000393214 761 ntBASIC5.34□□□□□ -1.55
APOBEC1P41238 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.34□□□□□ -1.55
APOBEC1P41238 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.34□□□□□ -1.55
APOBEC1P41238 RPL12P16-201ENST00000431098 498 ntBASIC5.34□□□□□ -1.55
APOBEC1P41238 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.34□□□□□ -1.55
APOBEC1P41238 AC023141.8-201ENST00000442554 208 ntBASIC5.34□□□□□ -1.55
APOBEC1P41238 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.34□□□□□ -1.55
APOBEC1P41238 Z83838.1-202ENST00000456225 839 ntBASIC5.34□□□□□ -1.55
APOBEC1P41238 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.34□□□□□ -1.55
APOBEC1P41238 RN7SL741P-201ENST00000482473 289 ntBASIC5.34□□□□□ -1.55
APOBEC1P41238 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.34□□□□□ -1.55
APOBEC1P41238 MIR2117-201ENST00000516780 80 ntBASIC5.34□□□□□ -1.55
APOBEC1P41238 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.34□□□□□ -1.55
APOBEC1P41238 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.34□□□□□ -1.55
APOBEC1P41238 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.34□□□□□ -1.55
APOBEC1P41238 AC079905.1-201ENST00000549280 475 ntBASIC5.34□□□□□ -1.55
APOBEC1P41238 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.34□□□□□ -1.55
APOBEC1P41238 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.34□□□□□ -1.55
APOBEC1P41238 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.34□□□□□ -1.55
APOBEC1P41238 MIR4776-2-201ENST00000580204 80 ntBASIC5.34□□□□□ -1.55
APOBEC1P41238 AP001496.3-201ENST00000580230 913 ntBASIC5.34□□□□□ -1.55
APOBEC1P41238 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.34□□□□□ -1.55
APOBEC1P41238 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.34□□□□□ -1.55
APOBEC1P41238 BNIP3P19-201ENST00000605397 577 ntBASIC5.34□□□□□ -1.55
APOBEC1P41238 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.34□□□□□ -1.55
APOBEC1P41238 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.34□□□□□ -1.55
APOBEC1P41238 AC015922.4-201ENST00000612568 690 ntBASIC5.34□□□□□ -1.55
APOBEC1P41238 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.34□□□□□ -1.55
APOBEC1P41238 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.34□□□□□ -1.55
APOBEC1P41238 AC106858.1-201ENST00000637497 429 ntBASIC5.34□□□□□ -1.55
APOBEC1P41238 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
APOBEC1P41238 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
APOBEC1P41238 AC027088.4-201ENST00000611559 1947 ntBASIC5.34□□□□□ -1.55
APOBEC1P41238 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.34□□□□□ -1.55
APOBEC1P41238 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
APOBEC1P41238 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
APOBEC1P41238 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
APOBEC1P41238 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
APOBEC1P41238 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
APOBEC1P41238 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
APOBEC1P41238 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
APOBEC1P41238 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
APOBEC1P41238 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
APOBEC1P41238 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
APOBEC1P41238 PARP4P2-201ENST00000446672 3326 ntBASIC5.33□□□□□ -1.56
APOBEC1P41238 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
APOBEC1P41238 AL161756.3-201ENST00000641216 2071 ntBASIC5.33□□□□□ -1.56
APOBEC1P41238 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
APOBEC1P41238 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
APOBEC1P41238 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.33□□□□□ -1.56
APOBEC1P41238 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
APOBEC1P41238 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
APOBEC1P41238 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
APOBEC1P41238 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
APOBEC1P41238 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
APOBEC1P41238 RNA5SP433-201ENST00000364491 114 ntBASIC5.33□□□□□ -1.56
APOBEC1P41238 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
APOBEC1P41238 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.33□□□□□ -1.56
APOBEC1P41238 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
APOBEC1P41238 AL096711.1-201ENST00000404780 554 ntBASIC5.33□□□□□ -1.56
APOBEC1P41238 RNU2-18P-201ENST00000411224 162 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms