Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXD12P35452 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXD12P35452 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXD12P35452 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXD12P35452 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXD12P35452 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXD12P35452 RNU6-152P-201ENST00000384037 107 ntBASIC6.19□□□□□ -1.42
HOXD12P35452 AL023284.3-201ENST00000407767 334 ntBASIC6.19□□□□□ -1.42
HOXD12P35452 RNA5SP156-201ENST00000410250 110 ntBASIC6.19□□□□□ -1.42
HOXD12P35452 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXD12P35452 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.19□□□□□ -1.42
HOXD12P35452 NPM1P26-201ENST00000426339 738 ntBASIC6.19□□□□□ -1.42
HOXD12P35452 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXD12P35452 PPIAP10-201ENST00000438675 458 ntBASIC6.19□□□□□ -1.42
HOXD12P35452 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXD12P35452 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXD12P35452 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.19□□□□□ -1.42
HOXD12P35452 BUD31P2-201ENST00000449374 300 ntBASIC6.19□□□□□ -1.42
HOXD12P35452 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXD12P35452 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXD12P35452 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXD12P35452 RN7SKP157-201ENST00000516174 282 ntBASIC6.19□□□□□ -1.42
HOXD12P35452 RNA5SP434-201ENST00000516647 121 ntBASIC6.19□□□□□ -1.42
HOXD12P35452 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXD12P35452 AC134349.2-201ENST00000535136 910 ntBASIC6.19□□□□□ -1.42
HOXD12P35452 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXD12P35452 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXD12P35452 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXD12P35452 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXD12P35452 AC051619.2-201ENST00000559063 397 ntBASIC6.19□□□□□ -1.42
HOXD12P35452 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.19□□□□□ -1.42
HOXD12P35452 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXD12P35452 AC092121.1-201ENST00000569452 202 ntBASIC6.19□□□□□ -1.42
HOXD12P35452 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.19□□□□□ -1.42
HOXD12P35452 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXD12P35452 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.19□□□□□ -1.42
HOXD12P35452 COX6CP7-201ENST00000597056 208 ntBASIC6.19□□□□□ -1.42
HOXD12P35452 AC022306.3-201ENST00000619930 550 ntBASIC6.19□□□□□ -1.42
HOXD12P35452 AL133370.2-201ENST00000619934 439 ntBASIC6.19□□□□□ -1.42
HOXD12P35452 AC105105.5-201ENST00000622635 1294 ntBASIC6.19□□□□□ -1.42
HOXD12P35452 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXD12P35452 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.19□□□□□ -1.42
HOXD12P35452 AL049767.1-202ENST00000637826 242 ntBASIC6.19□□□□□ -1.42
HOXD12P35452 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.19□□□□□ -1.42
HOXD12P35452 AC013488.1-201ENST00000526618 1838 ntBASIC6.19□□□□□ -1.42
HOXD12P35452 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXD12P35452 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
HOXD12P35452 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
HOXD12P35452 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXD12P35452 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.19□□□□□ -1.42
HOXD12P35452 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXD12P35452 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXD12P35452 MTCO1P15-201ENST00000529569 1526 ntBASIC6.19□□□□□ -1.42
HOXD12P35452 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
HOXD12P35452 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
HOXD12P35452 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
HOXD12P35452 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXD12P35452 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.18□□□□□ -1.42
HOXD12P35452 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXD12P35452 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXD12P35452 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD12P35452 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD12P35452 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.18□□□□□ -1.42
HOXD12P35452 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD12P35452 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD12P35452 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD12P35452 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD12P35452 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD12P35452 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HOXD12P35452 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD12P35452 RNA5SP242-201ENST00000364171 118 ntBASIC6.18□□□□□ -1.42
HOXD12P35452 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HOXD12P35452 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HOXD12P35452 U3.25-201ENST00000391209 220 ntBASIC6.18□□□□□ -1.42
HOXD12P35452 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.18□□□□□ -1.42
HOXD12P35452 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXD12P35452 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXD12P35452 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD12P35452 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD12P35452 VN1R110P-201ENST00000438988 971 ntBASIC6.18□□□□□ -1.42
HOXD12P35452 AL355355.1-201ENST00000442900 793 ntBASIC6.18□□□□□ -1.42
HOXD12P35452 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXD12P35452 MTND5P8-201ENST00000449817 1083 ntBASIC6.18□□□□□ -1.42
HOXD12P35452 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.18□□□□□ -1.42
HOXD12P35452 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXD12P35452 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD12P35452 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC6.18□□□□□ -1.42
HOXD12P35452 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXD12P35452 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXD12P35452 RNA5SP438-201ENST00000516561 112 ntBASIC6.18□□□□□ -1.42
HOXD12P35452 IGHV3-57-201ENST00000520143 280 ntBASIC6.18□□□□□ -1.42
HOXD12P35452 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXD12P35452 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.18□□□□□ -1.42
HOXD12P35452 ZNF322P1-201ENST00000568013 1209 ntBASIC6.18□□□□□ -1.42
HOXD12P35452 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.18□□□□□ -1.42
HOXD12P35452 AP003117.1-201ENST00000602771 554 ntBASIC6.18□□□□□ -1.42
HOXD12P35452 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.18□□□□□ -1.42
HOXD12P35452 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXD12P35452 RFPL4AP6-201ENST00000616792 846 ntBASIC6.18□□□□□ -1.42
HOXD12P35452 MRPL57P1-201ENST00000621486 265 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms