Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
HOXC12P31275 AP003072.4-201ENST00000624580 310 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC6.36□□□□□ -1.39
HOXC12P31275 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.36□□□□□ -1.39
HOXC12P31275 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
HOXC12P31275 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC12P31275 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.36□□□□□ -1.39
HOXC12P31275 AL359195.2-201ENST00000623657 4412 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC12P31275 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC12P31275 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.36□□□□□ -1.39
HOXC12P31275 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC6.36□□□□□ -1.39
HOXC12P31275 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC12P31275 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
HOXC12P31275 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC12P31275 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
HOXC12P31275 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC12P31275 AC245100.2-201ENST00000454544 1679 ntBASIC6.36□□□□□ -1.39
HOXC12P31275 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC12P31275 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC12P31275 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC12P31275 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC12P31275 OR4C1P-202ENST00000641065 1569 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
HOXC12P31275 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC12P31275 AC092104.1-201ENST00000497346 1441 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
HOXC12P31275 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC12P31275 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC12P31275 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC6.35□□□□□ -1.39
HOXC12P31275 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC12P31275 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC12P31275 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC6.35□□□□□ -1.39
HOXC12P31275 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.35□□□□□ -1.39
HOXC12P31275 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
HOXC12P31275 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC12P31275 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC12P31275 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC12P31275 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXC12P31275 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
HOXC12P31275 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC12P31275 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXC12P31275 RNU6-707P-201ENST00000364647 95 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 RNU12-2P-201ENST00000364789 156 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 RNU6-532P-201ENST00000384318 107 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 RNU6-185P-201ENST00000384421 107 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 TAF9BP1-201ENST00000396646 746 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 ARSFP1-201ENST00000398758 477 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.35□□□□□ -1.39
HOXC12P31275 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.35□□□□□ -1.39
HOXC12P31275 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.35□□□□□ -1.39
HOXC12P31275 OR5BE1P-201ENST00000425977 939 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 AC124944.2-201ENST00000429866 1242 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 AC244035.1-201ENST00000430042 390 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 KRTAP3-4P-201ENST00000430780 280 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 GTF2IP7-202ENST00000436677 309 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC6.35□□□□□ -1.39
HOXC12P31275 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC12P31275 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC6.35□□□□□ -1.39
HOXC12P31275 PSPC1P2-201ENST00000455130 225 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 VN1R6P-201ENST00000458417 907 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 AC110749.1-201ENST00000462007 357 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC6.35□□□□□ -1.39
HOXC12P31275 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.35□□□□□ -1.39
HOXC12P31275 MYL6P4-201ENST00000477911 453 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 RPL7P18-201ENST00000478965 734 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.35□□□□□ -1.39
HOXC12P31275 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.35□□□□□ -1.39
HOXC12P31275 AC010424.1-201ENST00000506336 297 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC6.35□□□□□ -1.39
HOXC12P31275 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC6.35□□□□□ -1.39
HOXC12P31275 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.35□□□□□ -1.39
HOXC12P31275 AC027801.3-201ENST00000515049 698 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.35□□□□□ -1.39
HOXC12P31275 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.35□□□□□ -1.39
HOXC12P31275 ZDHHC20P3-201ENST00000531576 336 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 AC022880.1-201ENST00000534017 973 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.35□□□□□ -1.39
HOXC12P31275 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXC12P31275 AC023310.2-201ENST00000553844 547 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.35□□□□□ -1.39
HOXC12P31275 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXC12P31275 RN7SL178P-201ENST00000582930 304 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.35□□□□□ -1.39
HOXC12P31275 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.35□□□□□ -1.39
HOXC12P31275 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXC12P31275 AL031777.2-201ENST00000611953 196 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 AC011472.4-201ENST00000615848 491 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 PDCD6IPP1-202ENST00000622242 1064 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 U6.107-201ENST00000637108 79 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 OR5BE1P-202ENST00000641168 1176 ntBASIC6.35□□□□□ -1.39
HOXC12P31275 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
HOXC12P31275 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
HOXC12P31275 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC12P31275 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC12P31275 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC12P31275 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.35□□□□□ -1.39
HOXC12P31275 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC12P31275 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC12P31275 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 189.3 ms