Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LMNB1P20700 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.8□□□□□ -1.16
LMNB1P20700 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
LMNB1P20700 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LMNB1P20700 SUCLA2P2-201ENST00000417269 1309 ntBASIC7.8□□□□□ -1.16
LMNB1P20700 AC104837.1-201ENST00000444644 1587 ntBASIC7.8□□□□□ -1.16
LMNB1P20700 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LMNB1P20700 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
LMNB1P20700 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LMNB1P20700 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
LMNB1P20700 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LMNB1P20700 RAD1P1-201ENST00000231383 813 ntBASIC7.8□□□□□ -1.16
LMNB1P20700 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LMNB1P20700 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LMNB1P20700 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
LMNB1P20700 OR9K1P-201ENST00000326513 941 ntBASIC7.8□□□□□ -1.16
LMNB1P20700 TMSB4XP2-201ENST00000335179 210 ntBASIC7.8□□□□□ -1.16
LMNB1P20700 RNFT1P3-201ENST00000340898 1052 ntBASIC7.8□□□□□ -1.16
LMNB1P20700 AL049697.3-201ENST00000406493 982 ntBASIC7.8□□□□□ -1.16
LMNB1P20700 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC7.8□□□□□ -1.16
LMNB1P20700 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC7.8□□□□□ -1.16
LMNB1P20700 RPL23AP85-201ENST00000421838 433 ntBASIC7.8□□□□□ -1.16
LMNB1P20700 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.8□□□□□ -1.16
LMNB1P20700 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC7.8□□□□□ -1.16
LMNB1P20700 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC7.8□□□□□ -1.16
LMNB1P20700 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC7.8□□□□□ -1.16
LMNB1P20700 CREM-220ENST00000463314 964 ntTSL 2 BASIC7.8□□□□□ -1.16
LMNB1P20700 RPL34P33-201ENST00000486062 334 ntBASIC7.8□□□□□ -1.16
LMNB1P20700 RPS12P31-201ENST00000491419 398 ntBASIC7.8□□□□□ -1.16
LMNB1P20700 RPS10P20-201ENST00000494130 463 ntBASIC7.8□□□□□ -1.16
LMNB1P20700 MTND6P8-201ENST00000503471 522 ntBASIC7.8□□□□□ -1.16
LMNB1P20700 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC7.8□□□□□ -1.16
LMNB1P20700 AC118282.2-201ENST00000508739 374 ntBASIC7.8□□□□□ -1.16
LMNB1P20700 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC7.8□□□□□ -1.16
LMNB1P20700 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.8□□□□□ -1.16
LMNB1P20700 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.8□□□□□ -1.16
LMNB1P20700 AC010547.7-201ENST00000570323 333 ntBASIC7.8□□□□□ -1.16
LMNB1P20700 MRPS21P9-201ENST00000571150 257 ntBASIC7.8□□□□□ -1.16
LMNB1P20700 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC7.8□□□□□ -1.16
LMNB1P20700 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.8□□□□□ -1.16
LMNB1P20700 AC020916.2-201ENST00000591242 360 ntBASIC7.8□□□□□ -1.16
LMNB1P20700 AC010503.3-201ENST00000594355 540 ntBASIC7.8□□□□□ -1.16
LMNB1P20700 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
LMNB1P20700 AL109653.1-201ENST00000603091 248 ntBASIC7.8□□□□□ -1.16
LMNB1P20700 AP001823.1-201ENST00000604056 1003 ntBASIC7.8□□□□□ -1.16
LMNB1P20700 AC080013.3-201ENST00000606839 578 ntBASIC7.8□□□□□ -1.16
LMNB1P20700 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC7.8□□□□□ -1.16
LMNB1P20700 AC091768.1-201ENST00000609258 930 ntBASIC7.8□□□□□ -1.16
LMNB1P20700 RFPL4AP6-201ENST00000616792 846 ntBASIC7.8□□□□□ -1.16
LMNB1P20700 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LMNB1P20700 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.8□□□□□ -1.16
LMNB1P20700 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LMNB1P20700 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
LMNB1P20700 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.8□□□□□ -1.16
LMNB1P20700 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LMNB1P20700 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
LMNB1P20700 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.8□□□□□ -1.16
LMNB1P20700 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.8□□□□□ -1.16
LMNB1P20700 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LMNB1P20700 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
LMNB1P20700 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LMNB1P20700 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
LMNB1P20700 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.8□□□□□ -1.16
LMNB1P20700 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
LMNB1P20700 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
LMNB1P20700 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
LMNB1P20700 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LMNB1P20700 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
LMNB1P20700 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
LMNB1P20700 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.79□□□□□ -1.16
LMNB1P20700 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LMNB1P20700 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.79□□□□□ -1.16
LMNB1P20700 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.79□□□□□ -1.16
LMNB1P20700 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LMNB1P20700 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LMNB1P20700 AL136984.1-201ENST00000607611 1893 ntBASIC7.79□□□□□ -1.16
LMNB1P20700 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LMNB1P20700 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LMNB1P20700 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.79□□□□□ -1.16
LMNB1P20700 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.79□□□□□ -1.16
LMNB1P20700 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LMNB1P20700 AL049634.1-201ENST00000453770 1720 ntBASIC7.79□□□□□ -1.16
LMNB1P20700 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LMNB1P20700 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LMNB1P20700 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LMNB1P20700 SNORD16-201ENST00000362803 99 ntBASIC7.79□□□□□ -1.16
LMNB1P20700 SNORA74A-201ENST00000364089 198 ntBASIC7.79□□□□□ -1.16
LMNB1P20700 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC7.79□□□□□ -1.16
LMNB1P20700 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
LMNB1P20700 AL603865.2-201ENST00000401679 213 ntBASIC7.79□□□□□ -1.16
LMNB1P20700 OR3A2-201ENST00000408891 1076 ntBASIC7.79□□□□□ -1.16
LMNB1P20700 RNU4-22P-201ENST00000411058 166 ntBASIC7.79□□□□□ -1.16
LMNB1P20700 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC7.79□□□□□ -1.16
LMNB1P20700 AC090960.1-201ENST00000421072 306 ntBASIC7.79□□□□□ -1.16
LMNB1P20700 BX119321.1-201ENST00000428912 797 ntBASIC7.79□□□□□ -1.16
LMNB1P20700 MTCO1P43-201ENST00000431831 488 ntBASIC7.79□□□□□ -1.16
LMNB1P20700 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC7.79□□□□□ -1.16
LMNB1P20700 AC245452.2-201ENST00000435222 392 ntBASIC7.79□□□□□ -1.16
LMNB1P20700 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC7.79□□□□□ -1.16
LMNB1P20700 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms