Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 TOPORSLP1-201ENST00000467693 2102 ntBASIC7.61□□□□□ -1.19
LIG1P18858 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LIG1P18858 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LIG1P18858 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
LIG1P18858 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.61□□□□□ -1.19
LIG1P18858 AC006213.6-201ENST00000623722 4179 ntBASIC7.61□□□□□ -1.19
LIG1P18858 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
LIG1P18858 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LIG1P18858 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LIG1P18858 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
LIG1P18858 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LIG1P18858 AL132875.1-201ENST00000403623 949 ntBASIC7.61□□□□□ -1.19
LIG1P18858 AL445213.1-201ENST00000412589 747 ntBASIC7.61□□□□□ -1.19
LIG1P18858 AF274854.1-201ENST00000413236 615 ntBASIC7.61□□□□□ -1.19
LIG1P18858 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LIG1P18858 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC7.61□□□□□ -1.19
LIG1P18858 MTND4P20-201ENST00000424125 869 ntBASIC7.61□□□□□ -1.19
LIG1P18858 AC104978.1-201ENST00000449387 391 ntBASIC7.61□□□□□ -1.19
LIG1P18858 AC009961.3-201ENST00000449832 765 ntBASIC7.61□□□□□ -1.19
LIG1P18858 OR52J1P-201ENST00000450596 932 ntBASIC7.61□□□□□ -1.19
LIG1P18858 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC7.61□□□□□ -1.19
LIG1P18858 RPL7P45-201ENST00000455851 743 ntBASIC7.61□□□□□ -1.19
LIG1P18858 RPS26P11-201ENST00000463445 348 ntBASIC7.61□□□□□ -1.19
LIG1P18858 AC128716.1-201ENST00000475129 166 ntBASIC7.61□□□□□ -1.19
LIG1P18858 RPS26P6-201ENST00000475156 348 ntBASIC7.61□□□□□ -1.19
LIG1P18858 RN7SL655P-201ENST00000486087 298 ntBASIC7.61□□□□□ -1.19
LIG1P18858 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC7.61□□□□□ -1.19
LIG1P18858 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC7.61□□□□□ -1.19
LIG1P18858 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LIG1P18858 AC091951.3-201ENST00000504093 246 ntBASIC7.61□□□□□ -1.19
LIG1P18858 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC7.61□□□□□ -1.19
LIG1P18858 B3GNTL1P1-201ENST00000509174 289 ntBASIC7.61□□□□□ -1.19
LIG1P18858 AC095052.1-201ENST00000509955 863 ntBASIC7.61□□□□□ -1.19
LIG1P18858 RNU6-943P-201ENST00000516960 98 ntBASIC7.61□□□□□ -1.19
LIG1P18858 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC7.61□□□□□ -1.19
LIG1P18858 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC7.61□□□□□ -1.19
LIG1P18858 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC7.61□□□□□ -1.19
LIG1P18858 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.61□□□□□ -1.19
LIG1P18858 RN7SL32P-201ENST00000580514 281 ntBASIC7.61□□□□□ -1.19
LIG1P18858 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC7.61□□□□□ -1.19
LIG1P18858 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC7.61□□□□□ -1.19
LIG1P18858 QTRT1P1-201ENST00000604344 1078 ntBASIC7.61□□□□□ -1.19
LIG1P18858 AC091193.1-201ENST00000604640 448 ntBASIC7.61□□□□□ -1.19
LIG1P18858 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC7.61□□□□□ -1.19
LIG1P18858 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC7.61□□□□□ -1.19
LIG1P18858 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.61□□□□□ -1.19
LIG1P18858 AL158163.2-201ENST00000619110 700 ntBASIC7.61□□□□□ -1.19
LIG1P18858 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
LIG1P18858 AC025262.3-201ENST00000623666 360 ntBASIC7.61□□□□□ -1.19
LIG1P18858 AC106782.7-201ENST00000624024 418 ntBASIC7.61□□□□□ -1.19
LIG1P18858 AC133555.5-201ENST00000624430 418 ntBASIC7.61□□□□□ -1.19
LIG1P18858 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.61□□□□□ -1.19
LIG1P18858 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.61□□□□□ -1.19
LIG1P18858 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.61□□□□□ -1.19
LIG1P18858 AC034229.2-201ENST00000566945 2508 ntBASIC7.61□□□□□ -1.19
LIG1P18858 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LIG1P18858 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
LIG1P18858 API5P1-201ENST00000424316 1510 ntBASIC7.61□□□□□ -1.19
LIG1P18858 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC7.61□□□□□ -1.19
LIG1P18858 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
LIG1P18858 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LIG1P18858 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LIG1P18858 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LIG1P18858 AC004023.1-201ENST00000561473 1744 ntBASIC7.61□□□□□ -1.19
LIG1P18858 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LIG1P18858 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LIG1P18858 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LIG1P18858 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.6□□□□□ -1.19
LIG1P18858 MAPK10-287ENST00000641217 3037 ntBASIC7.6□□□□□ -1.19
LIG1P18858 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.6□□□□□ -1.19
LIG1P18858 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LIG1P18858 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.6□□□□□ -1.19
LIG1P18858 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
LIG1P18858 NEK2P2-201ENST00000438441 1338 ntBASIC7.6□□□□□ -1.19
LIG1P18858 ECM1P2-201ENST00000503354 1577 ntBASIC7.6□□□□□ -1.19
LIG1P18858 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
LIG1P18858 AC010329.1-201ENST00000593903 8328 ntBASIC7.6□□□□□ -1.19
LIG1P18858 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC7.6□□□□□ -1.19
LIG1P18858 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
LIG1P18858 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC7.6□□□□□ -1.19
LIG1P18858 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LIG1P18858 RN7SKP118-201ENST00000364331 330 ntBASIC7.6□□□□□ -1.19
LIG1P18858 RN7SKP189-201ENST00000365042 330 ntBASIC7.6□□□□□ -1.19
LIG1P18858 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LIG1P18858 AL445183.3-201ENST00000414168 502 ntBASIC7.6□□□□□ -1.19
LIG1P18858 AC021876.1-201ENST00000425959 359 ntBASIC7.6□□□□□ -1.19
LIG1P18858 E2F6P1-201ENST00000428850 745 ntBASIC7.6□□□□□ -1.19
LIG1P18858 RPL3P11-201ENST00000434028 1146 ntBASIC7.6□□□□□ -1.19
LIG1P18858 NMNAT1P2-201ENST00000435192 860 ntBASIC7.6□□□□□ -1.19
LIG1P18858 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.6□□□□□ -1.19
LIG1P18858 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC7.6□□□□□ -1.19
LIG1P18858 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC7.6□□□□□ -1.19
LIG1P18858 MRPL35P4-201ENST00000453682 566 ntBASIC7.6□□□□□ -1.19
LIG1P18858 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.6□□□□□ -1.19
LIG1P18858 RPS6P2-201ENST00000454208 705 ntBASIC7.6□□□□□ -1.19
LIG1P18858 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC7.6□□□□□ -1.19
LIG1P18858 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC7.6□□□□□ -1.19
LIG1P18858 RN7SL216P-201ENST00000471607 298 ntBASIC7.6□□□□□ -1.19
LIG1P18858 MTND3P7-201ENST00000474435 343 ntBASIC7.6□□□□□ -1.19
LIG1P18858 AC105420.1-201ENST00000504389 582 ntBASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms