Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 RPS3AP38-201ENST00000435889 763 ntBASIC5.79□□□□□ -1.48
PCNAP12004 AC023141.3-201ENST00000436698 278 ntBASIC5.79□□□□□ -1.48
PCNAP12004 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.79□□□□□ -1.48
PCNAP12004 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.79□□□□□ -1.48
PCNAP12004 MTND5P8-201ENST00000449817 1083 ntBASIC5.79□□□□□ -1.48
PCNAP12004 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
PCNAP12004 PPIAP7-201ENST00000454070 489 ntBASIC5.79□□□□□ -1.48
PCNAP12004 NPM1P28-201ENST00000492269 840 ntBASIC5.79□□□□□ -1.48
PCNAP12004 AC112206.4-201ENST00000515142 405 ntBASIC5.79□□□□□ -1.48
PCNAP12004 SNORA26.10-201ENST00000516427 141 ntBASIC5.79□□□□□ -1.48
PCNAP12004 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.79□□□□□ -1.48
PCNAP12004 AP000620.1-201ENST00000527147 504 ntBASIC5.79□□□□□ -1.48
PCNAP12004 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.79□□□□□ -1.48
PCNAP12004 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.79□□□□□ -1.48
PCNAP12004 OR4R2P-201ENST00000530815 597 ntBASIC5.79□□□□□ -1.48
PCNAP12004 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.79□□□□□ -1.48
PCNAP12004 AC008126.1-201ENST00000549019 480 ntBASIC5.79□□□□□ -1.48
PCNAP12004 AC074029.2-201ENST00000551045 634 ntBASIC5.79□□□□□ -1.48
PCNAP12004 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.79□□□□□ -1.48
PCNAP12004 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.79□□□□□ -1.48
PCNAP12004 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.79□□□□□ -1.48
PCNAP12004 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.79□□□□□ -1.48
PCNAP12004 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCNAP12004 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.79□□□□□ -1.48
PCNAP12004 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.79□□□□□ -1.48
PCNAP12004 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.79□□□□□ -1.48
PCNAP12004 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.79□□□□□ -1.48
PCNAP12004 OR51C1P-201ENST00000608504 942 ntBASIC5.79□□□□□ -1.48
PCNAP12004 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.79□□□□□ -1.48
PCNAP12004 AC096861.1-201ENST00000616652 240 ntBASIC5.79□□□□□ -1.48
PCNAP12004 AC048341.3-201ENST00000619323 491 ntBASIC5.79□□□□□ -1.48
PCNAP12004 AC000095.2-202ENST00000637415 154 ntBASIC5.79□□□□□ -1.48
PCNAP12004 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
PCNAP12004 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCNAP12004 AC138907.8-201ENST00000623981 2256 ntBASIC5.79□□□□□ -1.48
PCNAP12004 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
PCNAP12004 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCNAP12004 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.79□□□□□ -1.48
PCNAP12004 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.79□□□□□ -1.48
PCNAP12004 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.79□□□□□ -1.48
PCNAP12004 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCNAP12004 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCNAP12004 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCNAP12004 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
PCNAP12004 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCNAP12004 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCNAP12004 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCNAP12004 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
PCNAP12004 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCNAP12004 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCNAP12004 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PCNAP12004 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCNAP12004 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
PCNAP12004 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.78□□□□□ -1.48
PCNAP12004 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.78□□□□□ -1.48
PCNAP12004 THAP12P9-201ENST00000503971 2360 ntBASIC5.78□□□□□ -1.48
PCNAP12004 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCNAP12004 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.78□□□□□ -1.48
PCNAP12004 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.78□□□□□ -1.48
PCNAP12004 SNORD1C-201ENST00000363315 78 ntBASIC5.78□□□□□ -1.48
PCNAP12004 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCNAP12004 GCNT1P4-201ENST00000404096 329 ntBASIC5.78□□□□□ -1.48
PCNAP12004 RN7SKP86-201ENST00000410454 332 ntBASIC5.78□□□□□ -1.48
PCNAP12004 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.78□□□□□ -1.48
PCNAP12004 GNG5P5-201ENST00000420444 220 ntBASIC5.78□□□□□ -1.48
PCNAP12004 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCNAP12004 AL353718.1-201ENST00000451028 517 ntBASIC5.78□□□□□ -1.48
PCNAP12004 AC092349.1-201ENST00000504903 310 ntBASIC5.78□□□□□ -1.48
PCNAP12004 AC008628.1-201ENST00000508663 265 ntBASIC5.78□□□□□ -1.48
PCNAP12004 AC025768.1-201ENST00000510057 267 ntBASIC5.78□□□□□ -1.48
PCNAP12004 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCNAP12004 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.78□□□□□ -1.48
PCNAP12004 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.78□□□□□ -1.48
PCNAP12004 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.78□□□□□ -1.48
PCNAP12004 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PCNAP12004 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.78□□□□□ -1.48
PCNAP12004 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.78□□□□□ -1.48
PCNAP12004 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.78□□□□□ -1.48
PCNAP12004 NPM1P42-201ENST00000560329 862 ntBASIC5.78□□□□□ -1.48
PCNAP12004 MTND4LP25-201ENST00000570218 163 ntBASIC5.78□□□□□ -1.48
PCNAP12004 MIR3154-201ENST00000577829 84 ntBASIC5.78□□□□□ -1.48
PCNAP12004 MIR4502-201ENST00000580432 81 ntBASIC5.78□□□□□ -1.48
PCNAP12004 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.78□□□□□ -1.48
PCNAP12004 AC016542.1-201ENST00000608259 493 ntBASIC5.78□□□□□ -1.48
PCNAP12004 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.78□□□□□ -1.48
PCNAP12004 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.78□□□□□ -1.48
PCNAP12004 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.78□□□□□ -1.48
PCNAP12004 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.78□□□□□ -1.48
PCNAP12004 MAPK10-350ENST00000641777 965 ntBASIC5.78□□□□□ -1.48
PCNAP12004 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCNAP12004 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.78□□□□□ -1.48
PCNAP12004 AC090181.3-201ENST00000624777 1514 ntBASIC5.78□□□□□ -1.48
PCNAP12004 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCNAP12004 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.78□□□□□ -1.48
PCNAP12004 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCNAP12004 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.78□□□□□ -1.48
PCNAP12004 AC133552.1-201ENST00000569988 4007 ntBASIC5.77□□□□□ -1.48
PCNAP12004 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCNAP12004 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCNAP12004 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms