Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HLA-DOAP06340 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HLA-DOAP06340 AC022034.1-201ENST00000512867 2156 ntBASIC6.86□□□□□ -1.31
HLA-DOAP06340 HSPA8P19-201ENST00000505359 1517 ntBASIC6.86□□□□□ -1.31
HLA-DOAP06340 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
HLA-DOAP06340 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.86□□□□□ -1.31
HLA-DOAP06340 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
HLA-DOAP06340 SALL4P7-201ENST00000555779 3120 ntBASIC6.86□□□□□ -1.31
HLA-DOAP06340 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.86□□□□□ -1.31
HLA-DOAP06340 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
HLA-DOAP06340 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HLA-DOAP06340 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HLA-DOAP06340 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HLA-DOAP06340 RNA5SP132-201ENST00000364725 118 ntBASIC6.86□□□□□ -1.31
HLA-DOAP06340 Z68694.1-201ENST00000413929 841 ntBASIC6.86□□□□□ -1.31
HLA-DOAP06340 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HLA-DOAP06340 AL596448.1-201ENST00000415024 392 ntBASIC6.86□□□□□ -1.31
HLA-DOAP06340 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.86□□□□□ -1.31
HLA-DOAP06340 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC6.86□□□□□ -1.31
HLA-DOAP06340 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.86□□□□□ -1.31
HLA-DOAP06340 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.86□□□□□ -1.31
HLA-DOAP06340 GAPDHP48-201ENST00000436626 961 ntBASIC6.86□□□□□ -1.31
HLA-DOAP06340 AC015983.1-201ENST00000441577 373 ntBASIC6.86□□□□□ -1.31
HLA-DOAP06340 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.86□□□□□ -1.31
HLA-DOAP06340 RN7SL72P-201ENST00000460697 269 ntBASIC6.86□□□□□ -1.31
HLA-DOAP06340 RN7SL177P-201ENST00000476596 299 ntBASIC6.86□□□□□ -1.31
HLA-DOAP06340 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.86□□□□□ -1.31
HLA-DOAP06340 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.86□□□□□ -1.31
HLA-DOAP06340 SCARNA1-201ENST00000517138 166 ntBASIC6.86□□□□□ -1.31
HLA-DOAP06340 AP001372.4-201ENST00000524889 472 ntBASIC6.86□□□□□ -1.31
HLA-DOAP06340 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.86□□□□□ -1.31
HLA-DOAP06340 AC027667.1-201ENST00000545814 304 ntBASIC6.86□□□□□ -1.31
HLA-DOAP06340 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.86□□□□□ -1.31
HLA-DOAP06340 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.86□□□□□ -1.31
HLA-DOAP06340 AC007346.2-201ENST00000564816 892 ntBASIC6.86□□□□□ -1.31
HLA-DOAP06340 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.86□□□□□ -1.31
HLA-DOAP06340 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.86□□□□□ -1.31
HLA-DOAP06340 AL049840.6-202ENST00000603373 279 ntBASIC6.86□□□□□ -1.31
HLA-DOAP06340 AL512624.1-201ENST00000613638 469 ntBASIC6.86□□□□□ -1.31
HLA-DOAP06340 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.86□□□□□ -1.31
HLA-DOAP06340 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.86□□□□□ -1.31
HLA-DOAP06340 AL450226.2-201ENST00000622913 439 ntBASIC6.86□□□□□ -1.31
HLA-DOAP06340 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.86□□□□□ -1.31
HLA-DOAP06340 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.86□□□□□ -1.31
HLA-DOAP06340 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
HLA-DOAP06340 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HLA-DOAP06340 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.86□□□□□ -1.31
HLA-DOAP06340 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HLA-DOAP06340 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.85□□□□□ -1.31
HLA-DOAP06340 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
HLA-DOAP06340 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HLA-DOAP06340 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.85□□□□□ -1.31
HLA-DOAP06340 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HLA-DOAP06340 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.85□□□□□ -1.31
HLA-DOAP06340 AL391361.1-201ENST00000405580 489 ntBASIC6.85□□□□□ -1.31
HLA-DOAP06340 OR6E1P-201ENST00000414424 923 ntBASIC6.85□□□□□ -1.31
HLA-DOAP06340 CR848007.2-201ENST00000424918 787 ntBASIC6.85□□□□□ -1.31
HLA-DOAP06340 AC113412.1-201ENST00000425840 504 ntBASIC6.85□□□□□ -1.31
HLA-DOAP06340 AC074367.1-201ENST00000438685 1125 ntBASIC6.85□□□□□ -1.31
HLA-DOAP06340 AL606517.1-201ENST00000446914 387 ntBASIC6.85□□□□□ -1.31
HLA-DOAP06340 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.85□□□□□ -1.31
HLA-DOAP06340 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.85□□□□□ -1.31
HLA-DOAP06340 RPS4XP14-201ENST00000493072 781 ntBASIC6.85□□□□□ -1.31
HLA-DOAP06340 EIF3LP3-201ENST00000495197 822 ntBASIC6.85□□□□□ -1.31
HLA-DOAP06340 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC6.85□□□□□ -1.31
HLA-DOAP06340 AC074255.1-201ENST00000511259 501 ntBASIC6.85□□□□□ -1.31
HLA-DOAP06340 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC6.85□□□□□ -1.31
HLA-DOAP06340 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.85□□□□□ -1.31
HLA-DOAP06340 AC008429.4-201ENST00000521201 182 ntBASIC6.85□□□□□ -1.31
HLA-DOAP06340 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.85□□□□□ -1.31
HLA-DOAP06340 MRPS16P1-201ENST00000523462 412 ntBASIC6.85□□□□□ -1.31
HLA-DOAP06340 AC138701.1-201ENST00000524329 714 ntBASIC6.85□□□□□ -1.31
HLA-DOAP06340 EIF4A2P3-201ENST00000525903 1055 ntBASIC6.85□□□□□ -1.31
HLA-DOAP06340 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.85□□□□□ -1.31
HLA-DOAP06340 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.85□□□□□ -1.31
HLA-DOAP06340 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.85□□□□□ -1.31
HLA-DOAP06340 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.85□□□□□ -1.31
HLA-DOAP06340 AL049779.3-201ENST00000557141 606 ntBASIC6.85□□□□□ -1.31
HLA-DOAP06340 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.85□□□□□ -1.31
HLA-DOAP06340 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.85□□□□□ -1.31
HLA-DOAP06340 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.85□□□□□ -1.31
HLA-DOAP06340 AL355974.3-201ENST00000617383 467 ntBASIC6.85□□□□□ -1.31
HLA-DOAP06340 AL049777.1-201ENST00000622740 518 ntBASIC6.85□□□□□ -1.31
HLA-DOAP06340 AL034408.1-201ENST00000637712 664 ntBASIC6.85□□□□□ -1.31
HLA-DOAP06340 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC6.85□□□□□ -1.31
HLA-DOAP06340 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HLA-DOAP06340 YES1P1-201ENST00000418510 1628 ntBASIC6.85□□□□□ -1.31
HLA-DOAP06340 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
HLA-DOAP06340 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.85□□□□□ -1.31
HLA-DOAP06340 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HLA-DOAP06340 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HLA-DOAP06340 IMMTP1-201ENST00000435590 2219 ntBASIC6.85□□□□□ -1.31
HLA-DOAP06340 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.85□□□□□ -1.31
HLA-DOAP06340 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
HLA-DOAP06340 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.85□□□□□ -1.31
HLA-DOAP06340 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HLA-DOAP06340 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.85□□□□□ -1.31
HLA-DOAP06340 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
HLA-DOAP06340 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.84□□□□□ -1.31
HLA-DOAP06340 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms