Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.46□□□□□ -1.54
CLPTM1O96005 AC007620.3-201ENST00000608131 497 ntBASIC5.46□□□□□ -1.54
CLPTM1O96005 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.46□□□□□ -1.54
CLPTM1O96005 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.46□□□□□ -1.54
CLPTM1O96005 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLPTM1O96005 SAMMSON-213ENST00000641336 1521 ntBASIC5.46□□□□□ -1.54
CLPTM1O96005 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLPTM1O96005 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLPTM1O96005 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLPTM1O96005 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
CLPTM1O96005 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.46□□□□□ -1.54
CLPTM1O96005 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CLPTM1O96005 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLPTM1O96005 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLPTM1O96005 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLPTM1O96005 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.46□□□□□ -1.54
CLPTM1O96005 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.46□□□□□ -1.54
CLPTM1O96005 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.46□□□□□ -1.54
CLPTM1O96005 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLPTM1O96005 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLPTM1O96005 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.45□□□□□ -1.54
CLPTM1O96005 AL133243.2-201ENST00000610331 1621 ntBASIC5.45□□□□□ -1.54
CLPTM1O96005 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLPTM1O96005 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLPTM1O96005 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.45□□□□□ -1.54
CLPTM1O96005 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CLPTM1O96005 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLPTM1O96005 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLPTM1O96005 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLPTM1O96005 RNA5SP232-201ENST00000364144 119 ntBASIC5.45□□□□□ -1.54
CLPTM1O96005 TRIM60P13-201ENST00000432350 1283 ntBASIC5.45□□□□□ -1.54
CLPTM1O96005 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.45□□□□□ -1.54
CLPTM1O96005 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.45□□□□□ -1.54
CLPTM1O96005 MTND3P4-201ENST00000453537 303 ntBASIC5.45□□□□□ -1.54
CLPTM1O96005 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.45□□□□□ -1.54
CLPTM1O96005 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.45□□□□□ -1.54
CLPTM1O96005 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.45□□□□□ -1.54
CLPTM1O96005 AC113367.2-201ENST00000505749 160 ntBASIC5.45□□□□□ -1.54
CLPTM1O96005 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.45□□□□□ -1.54
CLPTM1O96005 SEPT10P1-201ENST00000517342 1162 ntBASIC5.45□□□□□ -1.54
CLPTM1O96005 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.45□□□□□ -1.54
CLPTM1O96005 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.45□□□□□ -1.54
CLPTM1O96005 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.45□□□□□ -1.54
CLPTM1O96005 AC234775.3-201ENST00000564612 656 ntBASIC5.45□□□□□ -1.54
CLPTM1O96005 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.45□□□□□ -1.54
CLPTM1O96005 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.45□□□□□ -1.54
CLPTM1O96005 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.45□□□□□ -1.54
CLPTM1O96005 BNIP3P7-201ENST00000605641 516 ntBASIC5.45□□□□□ -1.54
CLPTM1O96005 AC010632.3-201ENST00000611377 369 ntBASIC5.45□□□□□ -1.54
CLPTM1O96005 MIR6721-201ENST00000617181 87 ntBASIC5.45□□□□□ -1.54
CLPTM1O96005 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.45□□□□□ -1.54
CLPTM1O96005 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.45□□□□□ -1.54
CLPTM1O96005 AC073488.6-201ENST00000632293 754 ntBASIC5.45□□□□□ -1.54
CLPTM1O96005 AL596275.2-207ENST00000641188 675 ntBASIC5.45□□□□□ -1.54
CLPTM1O96005 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
CLPTM1O96005 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.45□□□□□ -1.54
CLPTM1O96005 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLPTM1O96005 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.44□□□□□ -1.54
CLPTM1O96005 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLPTM1O96005 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLPTM1O96005 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLPTM1O96005 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLPTM1O96005 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLPTM1O96005 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLPTM1O96005 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CLPTM1O96005 AL589826.1-201ENST00000340697 249 ntBASIC5.44□□□□□ -1.54
CLPTM1O96005 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLPTM1O96005 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.44□□□□□ -1.54
CLPTM1O96005 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.44□□□□□ -1.54
CLPTM1O96005 RN7SKP86-201ENST00000410454 332 ntBASIC5.44□□□□□ -1.54
CLPTM1O96005 RNU2-18P-201ENST00000411224 162 ntBASIC5.44□□□□□ -1.54
CLPTM1O96005 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.44□□□□□ -1.54
CLPTM1O96005 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.44□□□□□ -1.54
CLPTM1O96005 RNGTTP1-201ENST00000420965 728 ntBASIC5.44□□□□□ -1.54
CLPTM1O96005 MTND2P11-201ENST00000423638 648 ntBASIC5.44□□□□□ -1.54
CLPTM1O96005 OR10T1P-201ENST00000424327 947 ntBASIC5.44□□□□□ -1.54
CLPTM1O96005 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.44□□□□□ -1.54
CLPTM1O96005 GAPDHP59-201ENST00000435908 267 ntBASIC5.44□□□□□ -1.54
CLPTM1O96005 TIMM8BP2-201ENST00000445940 251 ntBASIC5.44□□□□□ -1.54
CLPTM1O96005 AC089999.1-201ENST00000460336 374 ntBASIC5.44□□□□□ -1.54
CLPTM1O96005 AL603882.1-201ENST00000463059 681 ntBASIC5.44□□□□□ -1.54
CLPTM1O96005 AC104339.1-201ENST00000465478 348 ntBASIC5.44□□□□□ -1.54
CLPTM1O96005 RN7SL369P-201ENST00000477138 299 ntBASIC5.44□□□□□ -1.54
CLPTM1O96005 RN7SL741P-201ENST00000482473 289 ntBASIC5.44□□□□□ -1.54
CLPTM1O96005 RNU4-18P-201ENST00000516751 149 ntBASIC5.44□□□□□ -1.54
CLPTM1O96005 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CLPTM1O96005 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.44□□□□□ -1.54
CLPTM1O96005 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.44□□□□□ -1.54
CLPTM1O96005 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.44□□□□□ -1.54
CLPTM1O96005 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.44□□□□□ -1.54
CLPTM1O96005 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.44□□□□□ -1.54
CLPTM1O96005 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.44□□□□□ -1.54
CLPTM1O96005 AC093591.2-201ENST00000565254 3843 ntBASIC5.44□□□□□ -1.54
CLPTM1O96005 OR1E3-201ENST00000575608 948 ntBASIC5.44□□□□□ -1.54
CLPTM1O96005 RN7SL230P-201ENST00000580835 303 ntBASIC5.44□□□□□ -1.54
CLPTM1O96005 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.44□□□□□ -1.54
CLPTM1O96005 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLPTM1O96005 GMCL1P2-201ENST00000605230 823 ntBASIC5.44□□□□□ -1.54
CLPTM1O96005 RPSAP75-201ENST00000605848 301 ntBASIC5.44□□□□□ -1.54
CLPTM1O96005 AC141002.1-201ENST00000607025 279 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms