Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SLC28A1O00337 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SLC28A1O00337 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.49□□□□□ -1.53
SLC28A1O00337 AC005042.1-201ENST00000393397 800 ntBASIC5.49□□□□□ -1.53
SLC28A1O00337 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.49□□□□□ -1.53
SLC28A1O00337 AL357752.1-201ENST00000412817 349 ntBASIC5.49□□□□□ -1.53
SLC28A1O00337 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.49□□□□□ -1.53
SLC28A1O00337 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.49□□□□□ -1.53
SLC28A1O00337 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.49□□□□□ -1.53
SLC28A1O00337 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.49□□□□□ -1.53
SLC28A1O00337 AC126120.1-201ENST00000431082 470 ntBASIC5.49□□□□□ -1.53
SLC28A1O00337 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.49□□□□□ -1.53
SLC28A1O00337 TPTE2P1-204ENST00000435256 593 ntBASIC5.49□□□□□ -1.53
SLC28A1O00337 MTND2P40-201ENST00000436718 841 ntBASIC5.49□□□□□ -1.53
SLC28A1O00337 RAB9AP5-201ENST00000437794 597 ntBASIC5.49□□□□□ -1.53
SLC28A1O00337 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.49□□□□□ -1.53
SLC28A1O00337 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.49□□□□□ -1.53
SLC28A1O00337 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.49□□□□□ -1.53
SLC28A1O00337 RAB9AP2-201ENST00000443911 597 ntBASIC5.49□□□□□ -1.53
SLC28A1O00337 LINC02210-201ENST00000444561 288 ntBASIC5.49□□□□□ -1.53
SLC28A1O00337 TIMM8BP2-201ENST00000445940 251 ntBASIC5.49□□□□□ -1.53
SLC28A1O00337 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.49□□□□□ -1.53
SLC28A1O00337 NXT1P1-201ENST00000458481 316 ntBASIC5.49□□□□□ -1.53
SLC28A1O00337 PSAT1P4-201ENST00000466500 526 ntBASIC5.49□□□□□ -1.53
SLC28A1O00337 ATP5LP5-201ENST00000483050 299 ntBASIC5.49□□□□□ -1.53
SLC28A1O00337 AC021006.1-201ENST00000489849 553 ntBASIC5.49□□□□□ -1.53
SLC28A1O00337 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.49□□□□□ -1.53
SLC28A1O00337 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.49□□□□□ -1.53
SLC28A1O00337 HSD3BP3-201ENST00000514706 994 ntBASIC5.49□□□□□ -1.53
SLC28A1O00337 SNORA70.11-201ENST00000515987 138 ntBASIC5.49□□□□□ -1.53
SLC28A1O00337 SNORA70.13-201ENST00000516116 138 ntBASIC5.49□□□□□ -1.53
SLC28A1O00337 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.49□□□□□ -1.53
SLC28A1O00337 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.49□□□□□ -1.53
SLC28A1O00337 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.49□□□□□ -1.53
SLC28A1O00337 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.49□□□□□ -1.53
SLC28A1O00337 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.49□□□□□ -1.53
SLC28A1O00337 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.49□□□□□ -1.53
SLC28A1O00337 AL356801.1-201ENST00000559320 294 ntBASIC5.49□□□□□ -1.53
SLC28A1O00337 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.49□□□□□ -1.53
SLC28A1O00337 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
SLC28A1O00337 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.49□□□□□ -1.53
SLC28A1O00337 QTRT1P1-201ENST00000604344 1078 ntBASIC5.49□□□□□ -1.53
SLC28A1O00337 AC091167.5-201ENST00000605689 894 ntBASIC5.49□□□□□ -1.53
SLC28A1O00337 MIR6133-201ENST00000617057 108 ntBASIC5.49□□□□□ -1.53
SLC28A1O00337 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SLC28A1O00337 MTCO1P1-201ENST00000624263 1081 ntBASIC5.49□□□□□ -1.53
SLC28A1O00337 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.49□□□□□ -1.53
SLC28A1O00337 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SLC28A1O00337 AC104966.1-201ENST00000467010 1464 ntBASIC5.49□□□□□ -1.53
SLC28A1O00337 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SLC28A1O00337 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SLC28A1O00337 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.49□□□□□ -1.53
SLC28A1O00337 AL360270.2-201ENST00000562952 5985 ntBASIC5.49□□□□□ -1.53
SLC28A1O00337 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SLC28A1O00337 AP000473.2-201ENST00000602659 1537 ntBASIC5.48□□□□□ -1.53
SLC28A1O00337 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SLC28A1O00337 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.48□□□□□ -1.53
SLC28A1O00337 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SLC28A1O00337 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SLC28A1O00337 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
SLC28A1O00337 COX6B1P3-201ENST00000312310 260 ntBASIC5.48□□□□□ -1.53
SLC28A1O00337 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.48□□□□□ -1.53
SLC28A1O00337 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SLC28A1O00337 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.48□□□□□ -1.53
SLC28A1O00337 BX284632.2-201ENST00000421091 399 ntBASIC5.48□□□□□ -1.53
SLC28A1O00337 FAM183DP-201ENST00000421987 399 ntBASIC5.48□□□□□ -1.53
SLC28A1O00337 GAPDHP48-201ENST00000436626 961 ntBASIC5.48□□□□□ -1.53
SLC28A1O00337 AL512605.1-202ENST00000441919 381 ntBASIC5.48□□□□□ -1.53
SLC28A1O00337 AL359955.2-201ENST00000445380 353 ntBASIC5.48□□□□□ -1.53
SLC28A1O00337 AC093166.3-201ENST00000448785 303 ntBASIC5.48□□□□□ -1.53
SLC28A1O00337 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.48□□□□□ -1.53
SLC28A1O00337 RN7SL193P-201ENST00000491708 276 ntBASIC5.48□□□□□ -1.53
SLC28A1O00337 RBBP4P1-201ENST00000502424 1276 ntBASIC5.48□□□□□ -1.53
SLC28A1O00337 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.48□□□□□ -1.53
SLC28A1O00337 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.48□□□□□ -1.53
SLC28A1O00337 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.48□□□□□ -1.53
SLC28A1O00337 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.48□□□□□ -1.53
SLC28A1O00337 TRAV11-201ENST00000539512 339 ntBASIC5.48□□□□□ -1.53
SLC28A1O00337 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.48□□□□□ -1.53
SLC28A1O00337 MIR3154-201ENST00000577829 84 ntBASIC5.48□□□□□ -1.53
SLC28A1O00337 MIR744-201ENST00000578242 98 ntBASIC5.48□□□□□ -1.53
SLC28A1O00337 AC008507.3-201ENST00000585753 472 ntBASIC5.48□□□□□ -1.53
SLC28A1O00337 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.48□□□□□ -1.53
SLC28A1O00337 AC002069.2-201ENST00000603580 883 ntBASIC5.48□□□□□ -1.53
SLC28A1O00337 LSM1P2-201ENST00000604911 322 ntBASIC5.48□□□□□ -1.53
SLC28A1O00337 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.48□□□□□ -1.53
SLC28A1O00337 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SLC28A1O00337 AP001052.1-201ENST00000626421 99 ntBASIC5.48□□□□□ -1.53
SLC28A1O00337 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.48□□□□□ -1.53
SLC28A1O00337 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.48□□□□□ -1.53
SLC28A1O00337 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SLC28A1O00337 AC027279.1-201ENST00000568885 4284 ntBASIC5.48□□□□□ -1.53
SLC28A1O00337 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.48□□□□□ -1.53
SLC28A1O00337 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SLC28A1O00337 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SLC28A1O00337 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SLC28A1O00337 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SLC28A1O00337 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SLC28A1O00337 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.47□□□□□ -1.53
SLC28A1O00337 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms