Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 TBCA-207ENST00000520039 157 ntTSL 3 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AC092709.1-201ENST00000521355 1045 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AC130365.2-201ENST00000525882 1201 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 NEDD8-MDP1-202ENST00000534348 595 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AC011509.2-201ENST00000592263 627 ntTSL 3 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AC005332.4-201ENST00000592752 579 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AC008751.1-201ENST00000600438 342 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AC092032.1-201ENST00000603090 165 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AC099343.2-201ENST00000605082 686 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AC067852.7-201ENST00000623270 535 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AC005858.3-201ENST00000624756 589 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 LINC02495-203ENST00000636704 242 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 ATM-229ENST00000639953 587 ntTSL 5 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AL353743.3-201ENST00000442109 1468 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 FBXL21-201ENST00000297158 1305 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC007390.2-201ENST00000606229 3803 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 CASC19-238ENST00000641523 1558 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 RNA5SP355-201ENST00000365317 135 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 RNU1-74P-201ENST00000384108 171 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 MIR181C-201ENST00000384881 110 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 RNA5SP176-201ENST00000390956 110 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 RN7SKP168-201ENST00000410910 300 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 RPL21P108-201ENST00000413857 481 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 OR6E1P-201ENST00000414424 923 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AL157698.1-201ENST00000415190 1011 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 RAC1P3-201ENST00000416129 580 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 CLIC4P3-201ENST00000422221 752 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC099677.3-201ENST00000427081 395 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC007679.3-201ENST00000434035 414 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 NDUFB4P8-201ENST00000435351 367 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AP001595.1-201ENST00000435878 516 ntTSL 2 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 PCBP2P1-201ENST00000437262 977 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 ARL4AP3-201ENST00000441452 574 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 NDUFS5P3-201ENST00000450668 321 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 PPIAP7-201ENST00000454070 489 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC239798.3-201ENST00000454459 408 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC005008.1-201ENST00000456151 612 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC019084.1-201ENST00000457337 432 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC104164.1-201ENST00000460282 590 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 RPSAP39-201ENST00000467439 883 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 UOX-201ENST00000471089 899 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 RN7SL326P-201ENST00000477493 296 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 ATP5LP5-201ENST00000483050 299 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC093270.2-201ENST00000486157 792 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 MAST4-IT1-201ENST00000514241 658 ntBASIC2.97□□□□□ -1.93
CHKB-CPT1BH3BT56 AC010442.1-201ENST00000515583 816 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms