Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SMIM28A0A1B0GU29 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SMIM28A0A1B0GU29 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.96□□□□□ -1.45
SMIM28A0A1B0GU29 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SMIM28A0A1B0GU29 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
SMIM28A0A1B0GU29 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
SMIM28A0A1B0GU29 AC239868.2-201ENST00000564237 4527 ntBASIC5.96□□□□□ -1.45
SMIM28A0A1B0GU29 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 AC110716.2-201ENST00000563865 3945 ntBASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 HSPD1P7-201ENST00000447985 1686 ntBASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 OR9K1P-201ENST00000326513 941 ntBASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 SNORA16A-201ENST00000384342 137 ntBASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 RNU1-77P-201ENST00000390868 162 ntBASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 AC010740.1-201ENST00000417035 684 ntBASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 RPL7L1P9-201ENST00000431298 745 ntBASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 BX679664.2-201ENST00000439282 283 ntBASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 AL163193.1-201ENST00000444895 788 ntBASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 AL606490.1-201ENST00000452266 765 ntBASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 OR2AO1P-201ENST00000476497 403 ntBASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 AC024558.1-201ENST00000505008 528 ntBASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 RNA5SP34-201ENST00000516887 130 ntBASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 BLZF2P-201ENST00000553776 1130 ntBASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 NPM1P45-201ENST00000583151 559 ntBASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 AP004289.1-201ENST00000436307 2205 ntBASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 UGT2B24P-201ENST00000514441 1597 ntBASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SMIM28A0A1B0GU29 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 AC144833.1-201ENST00000567953 4089 ntBASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 RNA5SP183-201ENST00000362452 119 ntBASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 RNA5SP335-201ENST00000363817 110 ntBASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 RNU6-171P-201ENST00000384354 107 ntBASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 AL390774.1-201ENST00000411924 246 ntBASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 CYCSP6-201ENST00000434498 302 ntBASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 AC105399.1-202ENST00000447303 205 ntBASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 RPS26P41-201ENST00000450370 284 ntBASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 RN7SKP67-201ENST00000515905 235 ntBASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 OR4A6P-201ENST00000534364 970 ntBASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 AC126177.5-201ENST00000549599 178 ntBASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 OR7E18P-201ENST00000592589 702 ntBASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 AC004808.2-201ENST00000627965 773 ntBASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 SAMMSON-209ENST00000641222 1100 ntBASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 OR4F13P-202ENST00000560066 2054 ntBASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SMIM28A0A1B0GU29 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
SMIM28A0A1B0GU29 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms