Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC092634.1-201ENST00000366505 199 ntBASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AC245036.1-201ENST00000391727 309 ntBASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 RPL23AP59-201ENST00000399415 461 ntBASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 RNU4-27P-201ENST00000410889 139 ntBASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 RPL12P43-201ENST00000420608 499 ntBASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AL139413.1-201ENST00000421309 217 ntBASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 NAP1L4P2-201ENST00000425958 899 ntBASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AC009518.3-201ENST00000438972 253 ntBASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AC008379.1-201ENST00000463655 464 ntBASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 RN7SL88P-201ENST00000480166 299 ntBASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 RN7SL143P-201ENST00000496780 297 ntBASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 ATG10-AS1-201ENST00000504846 648 ntBASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AC138517.1-201ENST00000515724 568 ntBASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AC120036.3-201ENST00000517826 292 ntBASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AC023310.2-201ENST00000553844 547 ntBASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 UBE2V2P2-201ENST00000587677 504 ntBASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 RPSAP66-201ENST00000592196 606 ntBASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AC010463.3-201ENST00000594077 500 ntBASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AC026367.3-201ENST00000619032 590 ntBASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AC007823.1-201ENST00000569932 1566 ntBASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 AC034111.1-201ENST00000562143 3770 ntBASIC9.1□□□□□ -0.95
PDZRN3Q9UPQ7 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 TCEA1P4-201ENST00000415066 844 ntBASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 RPSAP60-201ENST00000415403 880 ntBASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 VDAC1P10-201ENST00000416715 891 ntBASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 NIFKP3-201ENST00000417799 865 ntBASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 AC091492.1-201ENST00000419844 272 ntBASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 BX119904.1-201ENST00000432026 348 ntBASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 Z80107.2-201ENST00000445127 392 ntBASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 AC108463.1-201ENST00000450258 347 ntBASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 RN7SL325P-201ENST00000460434 283 ntBASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 RPL23P10-201ENST00000468780 412 ntBASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 AC106800.2-201ENST00000514009 1103 ntBASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 MTCO1P35-201ENST00000515270 228 ntBASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 RPL10P18-201ENST00000519384 309 ntBASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 AC036176.3-201ENST00000602456 418 ntBASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 CLPTM1LP1-201ENST00000604519 484 ntBASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 AP005329.3-201ENST00000609924 686 ntBASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 AC098590.2-201ENST00000614787 281 ntBASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 MTND4P14-201ENST00000435799 1354 ntBASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms