Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC087565.3-203ENST00000641018 837 ntBASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 MT-RNR2-201ENST00000387347 1559 ntBASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
VPS29Q9UBQ0 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 AC079097.1-201ENST00000512187 1399 ntBASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 OR7E25P-201ENST00000344844 931 ntBASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 RN7SKP145-201ENST00000363291 303 ntBASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 RPS27AP6-201ENST00000427962 448 ntBASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 RPL5P2-201ENST00000429598 854 ntBASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 AZGP1P2-201ENST00000454506 345 ntBASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 MRPS16P1-201ENST00000523462 412 ntBASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 TOMM20P1-201ENST00000534518 427 ntBASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 OOSP1P2-201ENST00000579644 351 ntBASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 AC015802.2-201ENST00000589690 189 ntBASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 AL138895.2-201ENST00000603019 178 ntBASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 AC021766.1-201ENST00000624404 741 ntBASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 MRE11P1-201ENST00000464884 2127 ntBASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 AC006206.1-201ENST00000544842 3387 ntBASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 GVINP1-202ENST00000531871 7271 ntBASIC5.35□□□□□ -1.55
VPS29Q9UBQ0 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 SNORA70.6-201ENST00000383934 134 ntBASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 VN1R12P-201ENST00000403778 876 ntBASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 RMRPP5-201ENST00000411156 267 ntBASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 AL354766.1-201ENST00000423396 542 ntBASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 AC127526.2-201ENST00000426436 775 ntBASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 CDY8P-201ENST00000428380 1279 ntBASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 NDUFB4P8-201ENST00000435351 367 ntBASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 AC006335.2-201ENST00000437993 330 ntBASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 AC073465.2-201ENST00000440938 498 ntBASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 MED28P3-201ENST00000444288 531 ntBASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 CDY20P-201ENST00000447528 1279 ntBASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 HLA-DPA3-207ENST00000454398 229 ntBASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 RPS23P6-201ENST00000466136 431 ntBASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 AC011476.1-201ENST00000466725 307 ntBASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 AC093815.1-201ENST00000508637 280 ntBASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 AP001496.3-201ENST00000580230 913 ntBASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 AC129915.3-201ENST00000634128 948 ntBASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
VPS29Q9UBQ0 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
VPS29Q9UBQ0 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
VPS29Q9UBQ0 AL022311.1-201ENST00000623726 19416 ntBASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms