Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.93□□□□□ -1.46
CISHQ9NSE2 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CISHQ9NSE2 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CISHQ9NSE2 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.92□□□□□ -1.46
CISHQ9NSE2 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CISHQ9NSE2 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CISHQ9NSE2 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CISHQ9NSE2 AP002512.4-202ENST00000641599 4530 ntBASIC5.92□□□□□ -1.46
CISHQ9NSE2 AC018765.1-201ENST00000623357 3446 ntBASIC5.92□□□□□ -1.46
CISHQ9NSE2 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CISHQ9NSE2 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CISHQ9NSE2 RN7SKP185-201ENST00000362813 326 ntBASIC5.92□□□□□ -1.46
CISHQ9NSE2 RN7SKP28-201ENST00000364770 305 ntBASIC5.92□□□□□ -1.46
CISHQ9NSE2 RN7SKP6-201ENST00000364795 319 ntBASIC5.92□□□□□ -1.46
CISHQ9NSE2 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CISHQ9NSE2 MIR551A-201ENST00000385042 96 ntBASIC5.92□□□□□ -1.46
CISHQ9NSE2 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CISHQ9NSE2 RNA5SP178-201ENST00000410380 128 ntBASIC5.92□□□□□ -1.46
CISHQ9NSE2 RPL7P56-201ENST00000429441 717 ntBASIC5.92□□□□□ -1.46
CISHQ9NSE2 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.92□□□□□ -1.46
CISHQ9NSE2 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.92□□□□□ -1.46
CISHQ9NSE2 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.92□□□□□ -1.46
CISHQ9NSE2 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.92□□□□□ -1.46
CISHQ9NSE2 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.92□□□□□ -1.46
CISHQ9NSE2 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CISHQ9NSE2 RN7SL284P-201ENST00000498823 275 ntBASIC5.92□□□□□ -1.46
CISHQ9NSE2 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.92□□□□□ -1.46
CISHQ9NSE2 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.92□□□□□ -1.46
CISHQ9NSE2 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.92□□□□□ -1.46
CISHQ9NSE2 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.92□□□□□ -1.46
CISHQ9NSE2 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.92□□□□□ -1.46
CISHQ9NSE2 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.92□□□□□ -1.46
CISHQ9NSE2 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.92□□□□□ -1.46
CISHQ9NSE2 AC233699.1-201ENST00000569955 1168 ntBASIC5.92□□□□□ -1.46
CISHQ9NSE2 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
CISHQ9NSE2 AC012616.1-201ENST00000600294 197 ntBASIC5.92□□□□□ -1.46
CISHQ9NSE2 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.92□□□□□ -1.46
CISHQ9NSE2 AL118522.2-201ENST00000616045 615 ntBASIC5.92□□□□□ -1.46
CISHQ9NSE2 AC005618.4-201ENST00000625053 554 ntBASIC5.92□□□□□ -1.46
CISHQ9NSE2 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CISHQ9NSE2 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CISHQ9NSE2 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
CISHQ9NSE2 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CISHQ9NSE2 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CISHQ9NSE2 AC006206.1-201ENST00000544842 3387 ntBASIC5.92□□□□□ -1.46
CISHQ9NSE2 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CISHQ9NSE2 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CISHQ9NSE2 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CISHQ9NSE2 AL355834.1-201ENST00000556602 3965 ntBASIC5.91□□□□□ -1.46
CISHQ9NSE2 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CISHQ9NSE2 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CISHQ9NSE2 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.91□□□□□ -1.46
CISHQ9NSE2 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.91□□□□□ -1.46
CISHQ9NSE2 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CISHQ9NSE2 SNORA11.3-201ENST00000408471 128 ntBASIC5.91□□□□□ -1.46
CISHQ9NSE2 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.91□□□□□ -1.46
CISHQ9NSE2 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CISHQ9NSE2 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.91□□□□□ -1.46
CISHQ9NSE2 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CISHQ9NSE2 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.91□□□□□ -1.46
CISHQ9NSE2 AC092106.1-201ENST00000444291 373 ntBASIC5.91□□□□□ -1.46
CISHQ9NSE2 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CISHQ9NSE2 IGBP1P3-201ENST00000447449 1000 ntBASIC5.91□□□□□ -1.46
CISHQ9NSE2 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.91□□□□□ -1.46
CISHQ9NSE2 RN7SL188P-201ENST00000469842 285 ntBASIC5.91□□□□□ -1.46
CISHQ9NSE2 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.91□□□□□ -1.46
CISHQ9NSE2 RPL7P51-201ENST00000490532 749 ntBASIC5.91□□□□□ -1.46
CISHQ9NSE2 AC111000.6-201ENST00000514471 709 ntBASIC5.91□□□□□ -1.46
CISHQ9NSE2 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC5.91□□□□□ -1.46
CISHQ9NSE2 AC022404.1-201ENST00000555320 273 ntBASIC5.91□□□□□ -1.46
CISHQ9NSE2 MRPS21P9-201ENST00000571150 257 ntBASIC5.91□□□□□ -1.46
CISHQ9NSE2 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.91□□□□□ -1.46
CISHQ9NSE2 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.91□□□□□ -1.46
CISHQ9NSE2 AC104695.2-201ENST00000605056 775 ntBASIC5.91□□□□□ -1.46
CISHQ9NSE2 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.91□□□□□ -1.46
CISHQ9NSE2 SNORA11.6-201ENST00000619030 128 ntBASIC5.91□□□□□ -1.46
CISHQ9NSE2 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CISHQ9NSE2 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.91□□□□□ -1.46
CISHQ9NSE2 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.91□□□□□ -1.46
CISHQ9NSE2 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CISHQ9NSE2 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CISHQ9NSE2 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
CISHQ9NSE2 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
CISHQ9NSE2 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CISHQ9NSE2 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.9□□□□□ -1.46
CISHQ9NSE2 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.9□□□□□ -1.46
CISHQ9NSE2 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CISHQ9NSE2 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CISHQ9NSE2 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CISHQ9NSE2 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
CISHQ9NSE2 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CISHQ9NSE2 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.9□□□□□ -1.46
CISHQ9NSE2 RNU4-2-201ENST00000365668 141 ntBASIC5.9□□□□□ -1.46
CISHQ9NSE2 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CISHQ9NSE2 AC099670.2-201ENST00000435130 321 ntBASIC5.9□□□□□ -1.46
CISHQ9NSE2 AL390119.1-201ENST00000440329 312 ntBASIC5.9□□□□□ -1.46
CISHQ9NSE2 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CISHQ9NSE2 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.9□□□□□ -1.46
CISHQ9NSE2 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.9□□□□□ -1.46
CISHQ9NSE2 IGKV3D-34-201ENST00000522638 302 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms